LOCUS       NM_001099507            2574 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 2 receptor, 50 (Vom2r50), mRNA.
ACCESSION   NM_001099507 XM_001061646 XM_575663
VERSION     NM_001099507.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2574)
  AUTHORS   Young,J.M. and Trask,B.J.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
REFERENCE   2  (bases 1 to 2574)
  AUTHORS   Ryba,N.J. and Tirindelli,R.
  TITLE     A new multigene family of putative pheromone receptors
  JOURNAL   Neuron 19 (2), 371-379 (1997)
   PUBMED   9292726
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000004.1.
            
            On or before Jul 26, 2007 this sequence version replaced
            XM_575663.2, XM_001061646.1.
            
            Sequence Note: This record was generated from sequence identified
            by Janet Young (Fred Hutchinson Cancer Research Center).
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-224               JAXUCZ010000004.1  158487009-158487232
            225-522             JAXUCZ010000004.1  158488271-158488568
            523-1332            JAXUCZ010000004.1  158498635-158499444
            1333-1557           JAXUCZ010000004.1  158501614-158501838
            1558-1681           JAXUCZ010000004.1  158503039-158503162
            1682-2574           JAXUCZ010000004.1  158508360-158509252
FEATURES             Location/Qualifiers
     source          1..2574
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q42"
     gene            1..2574
                     /gene="Vom2r50"
                     /note="vomeronasal 2 receptor, 50"
                     /db_xref="GeneID:500312"
                     /db_xref="RGD:1566165"
     CDS             1..2574
                     /gene="Vom2r50"
                     /note="putative pheromone receptor V2R1-1"
                     /codon_start=1
                     /product="vomeronasal 2 receptor, 50 precursor"
                     /protein_id="NP_001092977.1"
                     /db_xref="GeneID:500312"
                     /db_xref="RGD:1566165"
                     /translation="MKLLIVLIAFSLLIVLIVFQEQISCFSLTKPASPGYYQDGDFVI
                     GGIFSLRVTAGDTRSRFGFKDTIYIPEYVYVDLTKHYQHILAMVFAIEKINKDTNILF
                     NMSLGFYLFNVDFIDMKAVESSMALLSGQTPPVPNYSCRPEKTDKLVAVIGGISTGIS
                     TRISQVLSLYNVPQISYAPFDQSLGTGVQLQSPYQFPVYTTALYQGIIQLLLYFTWVW
                     VGLVVPDDVRGELFLRDITEEMNNHGLCVAFAEKVPEFPAKDTVDRELFMERFTLTHV
                     IVAFGDTYSLLRFVYNIFCNTPFGNVWITTSDWDITTLPFQQNLGYTYFGGGLSFSVH
                     MDEILGFKDFLRRVQPRKYPQDIFIQDVWSNLFECPYLDKDWIRELSQCEQNGNLSTR
                     PLHLWDMNTSPSSYKIHAAVYAIAQALHEELSLIVEGDLLNKGVPRAPLPWKLHPFLQ
                     NGQLGRSTNEETVVNKEVSATKLDIFNYQSLQSSTKAQVKVGEFVFESHSVQHFSLND
                     ELITWGEHHSQTPFAVCSQSCMLGFRKTPVEGKPFCCFDCLPCPDGEIANETDMDQCI
                     KCPEDQYPNKQRNQCLPKITAFLSHEDTLGAVFISLAISFSAFSAMILGLFICYRDTP
                     IVRANNRNLSYLLLVSLMLCFFCSLIFIGQPRTVTCVLRQTIFGVVFSIAISAILAKT
                     FIVVVAFKAIKPGSTLQTWMVTRVSNAIVCCGSSIQVCICAVWLGTYPPFPDVDMQSE
                     FGQIILWCNEGSTLAFYCVLGYLGFLASLSLLIAFLARRLPDTFNEAKTITFSMLVFC
                     SVWISFVPAYLSSKGKNVVAVEILAILASSAGLLGCIFLPKCFVILLRSDDLPRKKFF
                     K"
     exon            1..224
                     /gene="Vom2r50"
                     /inference="alignment:Splign:2.1.0"
     exon            225..522
                     /gene="Vom2r50"
                     /inference="alignment:Splign:2.1.0"
     exon            523..1332
                     /gene="Vom2r50"
                     /inference="alignment:Splign:2.1.0"
     exon            1333..1557
                     /gene="Vom2r50"
                     /inference="alignment:Splign:2.1.0"
     exon            1558..1681
                     /gene="Vom2r50"
                     /inference="alignment:Splign:2.1.0"
     exon            1682..2574
                     /gene="Vom2r50"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaaattac tcattgtact cattgctttc tctctcctga ttgttctcat tgtattccag
       61 gaacaaattt cttgtttctc cttaactaaa cctgcttctc ctggctacta tcaagatggg
      121 gattttgtta ttggaggaat cttttccctt agagtgactg ctggagacac aagaagtaga
      181 tttggcttta aagatacaat ctatatacca gaatatgttt atgtggatct caccaaacat
      241 tatcagcata ttttggcaat ggtttttgct atagaaaaaa tcaacaagga cacaaatatt
      301 ctattcaata tgtccctggg attctatctc ttcaatgttg attttattga tatgaaggcc
      361 gtggaaagtt ctatggcttt gctctcagga cagacccccc cagttcctaa ctacagctgc
      421 aggcctgaga agactgataa gctggttgca gtgataggag gcatttcaac aggaatatca
      481 accaggatct cccaagttct aagtctctac aatgtccctc agatcagcta tgctcctttt
      541 gaccagagtc ttgggaccgg agtccagctg cagtctccat accagtttcc tgtgtacacc
      601 acagctttgt atcagggaat aattcaactg ctgctatact tcacttgggt ctgggttggt
      661 ctggtggttc cagatgatgt gaggggagaa ctcttcctta gggacatcac agaggagatg
      721 aacaaccatg gactttgtgt tgcatttgca gaaaaagttc cagaatttcc tgctaaggac
      781 acagtagaca gggaactttt tatggaaaga ttcacattga cccatgttat tgttgcattt
      841 ggtgacacat attctcttct gagatttgtc tacaacatct tttgcaatac cccttttggt
      901 aatgtctgga tcacaacttc tgattgggat atcaccacat taccctttca acaaaatcta
      961 ggttatacat attttggtgg aggattatca ttttctgttc acatggatga aattctggga
     1021 ttcaaggatt ttctcagaag agtccaacct aggaaatacc ctcaagatat ctttatccag
     1081 gatgtgtggt cgaacttatt tgaatgtcct tatttagata aggactggat cagggaactg
     1141 agtcaatgtg agcaaaatgg caacctcagt acacgacctc tgcatctttg ggatatgaat
     1201 acctcacctt caagctacaa aatccatgct gctgtatatg ccattgccca ggcccttcat
     1261 gaggagctgt cactcattgt ggaaggagac ttattgaata aaggtgtacc ccgagctcct
     1321 ctcccatgga agctccatcc attcttacaa aatggccagc tagggagaag caccaatgag
     1381 gaaactgttg tgaacaagga agtttcagca accaagcttg acatctttaa ttaccagtct
     1441 ctgcagagca gtaccaaagc tcaagtgaaa gttggcgagt ttgtctttga gtctcacagt
     1501 gttcaacatt tttccctaaa tgacgaactc ataacgtggg gtgaacacca cagtcagact
     1561 ccatttgctg tttgcagtca aagttgcatg cttggattta ggaaaacacc tgttgaaggg
     1621 aaaccattct gttgttttga ttgtctccca tgtccagatg gagagattgc aaatgaaacg
     1681 gatatggatc aatgcatcaa atgtcctgaa gatcagtatc caaataagca gaggaatcag
     1741 tgtctcccta aaattacagc atttttgtcc catgaagata ctctgggagc tgttttcatc
     1801 tccttggcca ttagtttttc tgccttttca gctatgattt taggattatt tatctgctat
     1861 cgggacacac ccattgtcag agcaaataac agaaatctca gttatctcct cctggtttct
     1921 ctaatgctct gcttcttttg ctcattaata ttcattggcc aacctagaac agtcacttgt
     1981 gtcttgagac aaacaatttt tggggttgta ttttccattg ccatttctgc tatcttggca
     2041 aagaccttca ttgtggttgt ggccttcaag gccatcaaac ctggaagcac tttacaaaca
     2101 tggatggtga cccgagtctc aaatgctata gtctgctgtg gttccagcat tcaagtgtgc
     2161 atctgtgcag tctggctggg aacgtatccc cctttccctg atgtcgacat gcagtcagag
     2221 tttgggcaaa tcatcctctg gtgtaacgag ggctccaccc ttgccttcta ttgtgttctg
     2281 gggtacttgg gctttctggc cagtctcagt ttgcttattg cttttcttgc tagaaggcta
     2341 ccagacacct tcaatgaggc aaaaacaatc acattcagca tgctggtttt ctgcagtgtg
     2401 tggatttctt ttgtacccgc ttacctgagc tccaaaggca aaaacgttgt ggctgtggaa
     2461 attcttgcaa ttctggcttc cagtgctggc ttactgggct gtatatttct tcccaaatgc
     2521 tttgtgatcc tactgagatc agatgacctt ccaagaaaga agttctttaa atga
//
