LOCUS       NM_001099462            2529 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus vomeronasal 2 receptor, 5 (Vom2r5), mRNA.
ACCESSION   NM_001099462 XM_001053048 XM_001053116
VERSION     NM_001099462.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2529)
  AUTHORS   Young,J.M. and Trask,B.J.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On or before Jul 26, 2007 this sequence version replaced
            XM_001053116.1, XM_001053048.1.
            
            Sequence Note: This record was generated from sequence identified
            by Janet Young (Fred Hutchinson Cancer Research Center).
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMEA5760383 [ECO:0000350]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-206               JAXUCZ010000001.1  2973745-2973950
            207-489             JAXUCZ010000001.1  2976521-2976803
            490-1293            JAXUCZ010000001.1  2977192-2977995
            1294-1518           JAXUCZ010000001.1  2978846-2979070
            1519-1642           JAXUCZ010000001.1  2980246-2980369
            1643-2529           JAXUCZ010000001.1  2981512-2982398
FEATURES             Location/Qualifiers
     source          1..2529
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1p13"
     gene            1..2529
                     /gene="Vom2r5"
                     /note="vomeronasal 2 receptor, 5"
                     /db_xref="GeneID:679691"
                     /db_xref="RGD:1585898"
     CDS             1..2529
                     /gene="Vom2r5"
                     /codon_start=1
                     /product="vomeronasal 2 receptor, 5 precursor"
                     /protein_id="NP_001092932.1"
                     /db_xref="GeneID:679691"
                     /db_xref="RGD:1585898"
                     /translation="MKKLCAFTIAIFSLKFCLILCSLTEPNCFWRIKSSEDNDGDLRS
                     DCGFVLFTHEGPIPEDFYNDIINFRIPARKYEFFLVLLFATDEINKNPYLLPNMSLIF
                     NIIFGLCEDTLGVLDKAYLHQNSNSELFNYYCGINQLCDVDLTGPSWTTSLKLSIYSR
                     TPKIFFGSFNPNLSDHDQFPYIYQIAAKDTYLFHGMVSLMFHFGWTWIGLVISDDDQG
                     IQFLSDLREEMQRHAICLAFVNMIPETMQIYKTRVKIYDQQLMTSSAKVVIIYGEVNS
                     TLELSFRRWAYLGAQRIWITTSQWDVITHKKDFSLDFSHGTVTFAHHHNDIAVFRNFM
                     QTINTSMYPVDISQSMLQWNHFNCSISKNKKKMDCFTFKNPLEWLIQHTFDMVLSEEG
                     YNLYNAVYAVAHTYHKLIFQQVESQKMEEPKGLFTDCQQVTSLLKTIEFTNPVGELVD
                     TKHKENQCATYDIFITWNFPQGLGLKVKIGSYFPCLPQSQQLHISEDWEWVTGETLIP
                     PSVCSMTCTAGFRKIHQKETADCCFDCVQCQENEIANDTADMEQCVKCPDDSYANLEQ
                     SQCLQRVVTFLAYEDPLGMALGCMALSFSAITILVLVTFVKYKDTPIVKANNRILSYI
                     LLISLVFCFLCSLLYIGHPNQATCILQQTTFAIFFTVAISTVLAKTITVVTAFKLTTP
                     ERRIKKIMIKGAINLLIPICTLIQLVLCAVWLVISPPFIDRDIQSEHGKVIIICNKGS
                     VIAFHFVLGYLGSLALGSFTVAFLARNLPDRFNEAKFLTFSMLVFYSVWITFLPVYHS
                     TRGKDMVIVEVFSILASSAGLLGCIFFQKCYVLLVRPDLNVLRK"
     exon            1..206
                     /gene="Vom2r5"
                     /inference="alignment:Splign:2.1.0"
     exon            207..489
                     /gene="Vom2r5"
                     /inference="alignment:Splign:2.1.0"
     exon            490..1293
                     /gene="Vom2r5"
                     /inference="alignment:Splign:2.1.0"
     exon            1294..1518
                     /gene="Vom2r5"
                     /inference="alignment:Splign:2.1.0"
     exon            1519..1642
                     /gene="Vom2r5"
                     /inference="alignment:Splign:2.1.0"
     exon            1643..2529
                     /gene="Vom2r5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaagaagc tgtgtgcttt cactattgcc attttttccc tgaagttttg tctcatcttg
       61 tgcagtttga ctgaacccaa ctgcttttgg aggataaaga gtagtgaaga taatgatgga
      121 gatttgcgaa gtgactgtgg ttttgttctt tttacacacg agggccctat tccagaagat
      181 ttttataatg acattattaa ttttaggata ccagcaagaa aatatgagtt ttttctggta
      241 ttgttatttg caactgatga gatcaacaag aatccttatc ttttgcccaa catgtctttg
      301 atatttaaca tcatttttgg cctgtgtgaa gatacattgg gagttctgga taaagcatat
      361 ttacatcaaa acagcaattc tgaactattt aattattact gtggtataaa tcaactttgt
      421 gatgtagacc ttacaggacc atcatggaca acatccttaa aactatcaat ttattcaaga
      481 acaccaaaga ttttctttgg ctcatttaac cctaatctga gtgaccatga ccagtttccc
      541 tatatctatc agatagcagc caaggacaca tatttgttcc atggcatggt ctccttgatg
      601 tttcattttg gatggacttg gataggactg gtcatctcag atgatgacca aggtattcag
      661 tttctttcag acttgagaga agaaatgcaa aggcatgcaa tctgtttagc ttttgtgaat
      721 atgatcccag aaaccatgca gatatacaag acaagagtta agatatatga ccaacaactt
      781 atgacatctt cagcaaaggt tgttatcatt tatggagaag tgaactccac tctagaactc
      841 agctttagaa gatgggcata tttaggtgca cagagaatct ggatcacaac ctcacaatgg
      901 gatgtcatca cacataaaaa agatttcagc cttgatttct cccacgggac tgtcactttt
      961 gcccaccacc acaatgacat tgctgtattt agaaatttta tgcaaacaat aaacacatcc
     1021 atgtatccgg tagacatttc gcagtctatg ctgcagtgga atcattttaa ctgttcaatc
     1081 tcaaagaaca agaagaaaat ggattgtttt acgttcaaaa acccattaga atggttaata
     1141 cagcatacat ttgacatggt cctgagtgaa gaaggttaca atttgtataa tgctgtgtat
     1201 gctgtggccc acacctacca taaactcatt tttcaacaag tagagtctca gaaaatggaa
     1261 gaacccaaag gattattcac cgactgtcag caggtgactt ctttgctgaa aactattgaa
     1321 tttactaacc ctgttggaga actggtggac acgaaacata aggaaaatca gtgtgccacg
     1381 tatgacattt tcatcacttg gaattttcca caaggcctcg gattaaaagt gaaaatagga
     1441 agctattttc cttgtttgcc acagagtcaa caacttcata tatctgaaga ctgggagtgg
     1501 gtcacaggag aaacattgat tcccccctca gtgtgtagta tgacatgtac tgcaggattc
     1561 agaaaaattc atcagaaaga aacagccgat tgctgctttg attgtgtcca gtgtcaagaa
     1621 aatgagattg ccaatgatac agcagatatg gagcagtgtg tgaaatgtcc agatgattca
     1681 tatgccaact tagaacaaag ccagtgtctc caaagagtgg tgacatttct cgcttatgaa
     1741 gatccactgg gcatggctct aggctgcatg gccctgtcct tctcagccat cacaatccta
     1801 gtcctggtca cttttgtgaa gtacaaagat acacccattg tgaaagccaa caaccgcatt
     1861 ctcagctaca tcctgctcat atctctagtc ttctgttttc tctgctcatt gctctacatt
     1921 ggacacccca accaggccac ctgcatcctg cagcagacca catttgcaat atttttcact
     1981 gttgctattt ctactgtgtt ggccaaaaca ataactgtgg tcacagcttt caagctcact
     2041 actccagaga gaaggataaa aaagataatg ataaaagggg caattaactt gctcattccc
     2101 atttgcaccc taatccaact tgttctctgt gcagtctggt tggtgatatc tcctccattt
     2161 attgacagag atatacaatc tgaacatggg aaggtaatca tcatttgcaa caaaggctca
     2221 gtcattgcct tccactttgt cttgggatat ttgggctcct tggctctggg gagcttcact
     2281 gtggctttct tggctaggaa ccttcctgac agattcaatg aggccaagtt cttaacattc
     2341 agcatgttgg tgttctacag tgtttggatc accttcctcc ctgtctacca cagcaccagg
     2401 gggaaggata tggttattgt ggaggttttc tccatcttgg cttctagtgc agggttgcta
     2461 gggtgtatat ttttccaaaa gtgttatgtt cttttagttc gaccagattt aaatgttctt
     2521 cggaaatag
//
