LOCUS       XM_008761059            3013 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal 2 receptor, 45 (Vom2r45),
            transcript variant X2, mRNA.
ACCESSION   XM_008761059
VERSION     XM_008761059.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_008761059.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3013
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3013
                     /gene="Vom2r45"
                     /note="vomeronasal 2 receptor, 45; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 13 Proteins, and 19% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:295090"
                     /db_xref="RGD:1306812"
     CDS             1..2754
                     /gene="Vom2r45"
                     /codon_start=1
                     /product="vomeronasal type-2 receptor 1 isoform X2"
                     /protein_id="XP_008759281.1"
                     /db_xref="GeneID:295090"
                     /db_xref="RGD:1306812"
                     /translation="MASRKKCLILGLTVFLWVELYAQNEEQNVTCRLLRKFNLTGYVE
                     AANHSMVIGGLFPIHSRTIPTNDSDEEPVSAIASQKLFLSRFNFRGFRWMKTMIHTIK
                     EINGRKDILPNHTLGYQIFDTCFSVSKAMETALVFLTGQEENKPNFRNSTGKYLVGII
                     GSGGSSLSVAASRILGLYYMPQVGYTSSCSILSDKFQFPSFYRSIPSDKIQSEAMVNL
                     IKHFGWVWVGAIAADDDYGKYGVKSFREKMESANLCVAFSETIPKVYSNEKMQKAVKA
                     VKSSTAKVIVLFTTDIDLSPFVLEVVHHNITDRTWIASEAWITSALVAKPEYFPYFGG
                     TIGFAIPRSVIPGLKEFLYDIHPSKDPKDVLTIEFWQTAFNCTWPNSTVPYNVDHRVN
                     MTGKEDRLYAMSNQLCTGEEKLEDLKNTYLDTSQLRITNNVKQAVYLMAYALDRLSNC
                     DLLEEYSNSTACSHIPDFEPREMLPYFKKLKITTHDGTEIELDNNGDIENGYYDILNW
                     HLGNAGEVAFVKVGEYKFTSSKYELVLPKNSSLFWNTESSMLPDSVCTKLCAPGTRKG
                     VRQGQPICCFDCIPCADGYVSEKQGQRECDPCGEDDWSNAEKSKCVPKLVEFLAYEEA
                     LGFTLVILSIFGAIVVFAVTIVYVIHRHTPLVKANDRELSFLIQMSLGITVLSSMLFI
                     GKPSNWTCMARQVTLALGFCLCLSSTLGKTISLFFAYRISKSKTRLISMHPVFRKLIV
                     LFCVVGEIGVCAAYLVLEPPRMFKNIESQNVKIIFECNEGSIEFLCAIFGFDVFLALL
                     CFLTTFVARKLPDNYYEGKCITFGMLVFFIVWISFVPAYLSTKGKFKVAVEIFAILAS
                     SYGLLGCIFLPKCFIILLRPKRNTDETVGGRVPTVDRSIQLTSASVSSELNSTTVSTV
                     LDE"
ORIGIN      
        1 atggctagca gaaagaagtg cttgattctg ggattgactg tatttttgtg ggttgaatta
       61 tatgctcaaa atgaagagca gaatgtgaca tgcaggctgc tgcgcaagtt taatctgact
      121 ggatacgtag aggctgcaaa ccactccatg gttattggag gactatttcc tattcactct
      181 agaaccatcc caacaaatga ctctgatgag gaacccgtat cagccattgc ctcacaaaag
      241 cttttccttt ccaggtttaa tttccggggt ttccgctgga tgaaaaccat gatccacacc
      301 atcaaggaga ttaatggaag gaaggacatt ttgcccaacc acactctggg ctaccagatc
      361 tttgacacct gtttttctgt ctccaaagca atggagactg ctttggtatt tcttacagga
      421 caggaagaaa acaagcccaa ttttagaaac agcactggaa aatatctggt aggaattatt
      481 ggatcaggag gctcatcctt gtcagttgct gcttcaagaa ttctggggtt gtattacatg
      541 cctcaggttg gttatacttc ttcctgctca attcttagtg acaaattcca gtttccatct
      601 ttttatcgct caatacccag tgataagatc cagtctgagg ccatggtgaa tcttatcaaa
      661 cactttggtt gggtctgggt aggtgctatt gcagctgatg acgattatgg aaaatatgga
      721 gtaaaatcat ttagggaaaa aatggagagt gccaacctct gtgttgcttt ctctgaaacc
      781 attccaaaag tctactccaa tgagaaaatg caaaaagctg ttaaggcggt aaaaagttcc
      841 actgccaaag tcattgtgct ttttacaact gacattgacc tcagcccctt tgtgctggaa
      901 gtggttcatc acaacataac cgacaggaca tggatagcca gtgaagcctg gattacctca
      961 gctcttgttg caaagcctga gtattttcct tattttggag gaaccattgg atttgcaatc
     1021 ccgagaagtg ttataccagg attaaaagaa tttctttatg atatacaccc tagcaaggat
     1081 ccaaaggatg tcttgaccat tgaattctgg caaactgctt ttaactgtac ctggcccaac
     1141 agcactgtgc cttacaacgt ggaccacaga gtgaatatga ctggaaaaga agacagatta
     1201 tatgctatgt ctaatcagct ctgcaccgga gaggagaagc tggaggatct gaaaaatacc
     1261 tatctagata catctcagct gagaattaca aacaatgtca aacaagctgt gtatcttatg
     1321 gcttatgccc tggatcgttt aagcaattgt gacttattgg aagaatatag taatagtaca
     1381 gcatgttcac atatacctga ctttgagccc agagagatgc tgccttactt taagaaattg
     1441 aaaattacta cccatgatgg aacagaaata gaacttgata acaatggaga tatagaaaat
     1501 ggatattatg atatcctcaa ttggcacttg ggcaatgctg gagaagttgc ctttgtcaag
     1561 gttggagaat acaaattcac aagttcaaaa tatgaacttg ttcttccaaa gaactcatca
     1621 ttgttttgga acactgaatc ttcaatgctt ccagattcag tctgcacaaa actgtgtgct
     1681 ccagggactc gaaagggggt tcgacaggga caacccatat gctgctttga ttgcatccca
     1741 tgtgctgatg gatatgtgtc agagaaacaa ggccaaaggg aatgtgatcc atgtggtgaa
     1801 gatgactggt ccaatgcaga aaagagcaag tgtgtgccaa agcttgtgga attccttgct
     1861 tatgaagagg ccctggggtt cacccttgtc atcctttcca tatttggggc aattgtggtc
     1921 tttgcagtca ccattgtgta tgtgatacac agacatactc cattggtgaa agccaatgac
     1981 agagagttga gtttcctcat tcagatgtct ctgggaatca cagtgctatc atctatgttg
     2041 ttcataggaa agccatccaa ctggacctgc atggcccgcc aggtcactct ggcactgggc
     2101 ttttgccttt gtctgtcttc cactcttgga aagactattt cactcttttt tgcctacagg
     2161 atttccaaat ccaaaacccg gcttatatcc atgcaccctg tttttcgaaa attaattgtg
     2221 ctgttctgtg ttgtagggga gattggtgta tgtgcagctt acttggtgct ggagcctcca
     2281 aggatgttca agaacattga atctcaaaat gtaaagatca tctttgaatg taatgaaggg
     2341 tctatagagt ttctgtgtgc tatatttggg tttgatgttt ttctggctct actgtgtttc
     2401 ctaacaacct ttgtggctcg caagctgcca gataactatt atgaagggaa atgtatcact
     2461 tttgggatgc tggtcttttt cattgtctgg atctcctttg tccctgctta cttgagcacc
     2521 aaaggcaaat tcaaagttgc tgtggaaata tttgccattt tggcatccag ctatggcttg
     2581 ttaggctgta tatttcttcc caagtgtttc attatcttgc tgaggccaaa gaggaacacg
     2641 gatgaaactg ttggtggaag agtccccact gttgacagga gcatccagct gacctcagcc
     2701 tctgtgagca gtgagcttaa cagcacaaca gtgtcaactg ttctggatga ataaagctgt
     2761 gagctccatg tgacatacaa ggacgccacc ttggatgaca tcctgactca accttccctt
     2821 ttatgcttca tctgaagcag ctggtgatat tctagggtaa tattggttgt ggctatgctg
     2881 gtgtaaggtt aacctgctca ataatatttt gttctgtgac atgccattca gcatagattg
     2941 caatgacaca tataatttaa attacaaacc atatcttttg gactttaaag tagagggtat
     3001 aaataaacat gat
//
