LOCUS       NM_001415021            8744 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 2 receptor 44 (Vom2r44), mRNA.
ACCESSION   NM_001415021 XM_017590654
VERSION     NM_001415021.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 8744)
  AUTHORS   Young,J.M. and Trask,B.J.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
REFERENCE   2  (bases 1 to 8744)
  AUTHORS   Martini,S., Silvotti,L., Shirazi,A., Ryba,N.J. and Tirindelli,R.
  TITLE     Co-expression of putative pheromone receptors in the sensory
            neurons of the vomeronasal organ
  JOURNAL   J Neurosci 21 (3), 843-848 (2001)
   PUBMED   11157070
REFERENCE   3  (bases 1 to 8744)
  AUTHORS   Ryba,N.J. and Tirindelli,R.
  TITLE     A new multigene family of putative pheromone receptors
  JOURNAL   Neuron 19 (2), 371-379 (1997)
   PUBMED   9292726
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Dec 20, 2022 this sequence version replaced XM_017590654.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1917              JAXUCZ010000002.1  150646806-150648722
            1918-1993           JAXUCZ010000002.1  150650058-150650133
            1994-2285           JAXUCZ010000002.1  150661623-150661914
            2286-3158           JAXUCZ010000002.1  150665067-150665939
            3159-3389           JAXUCZ010000002.1  150676676-150676906
            3390-3513           JAXUCZ010000002.1  150678986-150679109
            3514-8744           JAXUCZ010000002.1  150680461-150685691
FEATURES             Location/Qualifiers
     source          1..8744
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q31"
     gene            1..8744
                     /gene="Vom2r44"
                     /gene_synonym="Casrl1"
                     /note="vomeronasal 2 receptor 44"
                     /db_xref="GeneID:266778"
                     /db_xref="RGD:708515"
     exon            1..1917
                     /gene="Vom2r44"
                     /gene_synonym="Casrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1918..1993
                     /gene="Vom2r44"
                     /gene_synonym="Casrl1"
                     /inference="alignment:Splign:2.1.0"
     CDS             1983..4496
                     /gene="Vom2r44"
                     /gene_synonym="Casrl1"
                     /note="calcium-sensing receptor like 1; tissue-type
                     vomeronasal neurons putative pheromone receptor V2R2"
                     /codon_start=1
                     /product="vomeronasal type-2 receptor 1"
                     /protein_id="NP_001401950.1"
                     /db_xref="GeneID:266778"
                     /db_xref="RGD:708515"
                     /translation="MCEGFNFRGFRWMKTMIHTIKEINARKDILPNHTLGYQIFDSCY
                     TISKAMESSLVFLTGQEEFKPNFRNSTGSTLAAMVGAGGSSLSVAASRILGLYYMPQV
                     GYTSSCSILSDKFQFPSYLRVVPSDKIQSEAMVNLIKHFGWVWVGAVAADDDYGKYGV
                     KTFKEKMESANLCVAFSETIPKVYSNEKMQKAINAVKNSTAKVIVLYTSDIDLSPFVL
                     ELIHHNVTDRTWIASEAWITSALIAKPEYFPYFGGSIGFALPRTTIPGLKEFLYDIHP
                     SKDPNDVLTIEFWQTAFNCTWPNSSVPYNVDHRVNMTGKEDRLYDMSDQLCTGEEKLE
                     DLKNTYLDMTQLRITNNVKQAVYAIAHALDLLSRCQEGYGPFGTNNACAYIPTFDFWQ
                     LMYYMKEIKFKSHEEKWVVLDDNGDLKFGHYDILNWQLDDSGEISFVTVGRFNFKTDM
                     FELIIPTNSTIFWNTESSRRPDSFCTQVCPPGTRKGIRQGQPICCFDCIPCADGYVSE
                     NPGQRECDPCGEDDWSNAEKSKCVPKLVEFLAYEEALGLTLVILSIFGALVVLAVTVV
                     YVIYRHTPLVKANDRELSFLIQMSLVITVLSSMLFIGKSCNWTCMARQVTLALGFCLC
                     LSSTLGKTISLFFAYRISKSKTRLISMSPIYRKLIVLICVVGEIGVCTAYLVLEPPRM
                     FKNIEPQNVKIIFECNEGSIEFLCAIFGFDVFLALLCFLTTFVARKLPDNYYEGKCIT
                     FGMLVFFIVWISFVPAYLSTKGKFKVAVEIFAILASSYGLLGCIFLPKCFIILLRPKR
                     NTDETVGGRVPTVDRSIQLTSASVSSELNNTAVSTVLDE"
     exon            1994..2285
                     /gene="Vom2r44"
                     /gene_synonym="Casrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            2286..3158
                     /gene="Vom2r44"
                     /gene_synonym="Casrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            3159..3389
                     /gene="Vom2r44"
                     /gene_synonym="Casrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            3390..3513
                     /gene="Vom2r44"
                     /gene_synonym="Casrl1"
                     /inference="alignment:Splign:2.1.0"
     exon            3514..8744
                     /gene="Vom2r44"
                     /gene_synonym="Casrl1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttaatcctac tgattcatga tcacgggaga tctttccatc ttctgatatc ttcttcagtt
       61 tctttcttca gggacttgaa gttttgtcat tcagtctttc acttgcttgg ttagagttat
      121 actgagatat cttaagtcat atgtgactat tttgaaggat gttttctcct taactttttt
      181 ctcgacccat ttatcatttg tataaaggag agctaccaat ttccttgagc taattttgta
      241 tctagacacc ttgctgaagg tgtttattag ctgtaggagt tttctggtag aactttgaca
      301 gtcacttatg tatactattt tatcacccat gcagaactac tcaattcaat actgttttcc
      361 aaaataggta cagaacacca acacagtctg acagcagtaa gttagaggaa gtatgattca
      421 ctttagatca ttttcgtgac agggaagcgt gatggttgga gctcttgact acgtttgtag
      481 ctttgtggtt gactacattt tgatagcagc cagaaagcaa atagaggata gaaagtaggg
      541 cctgtatgta agatccttct tcagttactg acttcctata cctaggcctt gcttcctaaa
      601 ggttccataa cgtaccctgt cagcagcacc agctagggaa ttaggcacga gcttacagtg
      661 aatatttcac attcgaacgg tgtcaagcat gattagtaag tattagtaaa gtagttggct
      721 tttcagagcc tcactgggct cacgtgtttt ctttgcttgg aggcaaagat aagtctagac
      781 agaatctatc actatttctg aaagaggcct gagtgcctta gaccttcaag gctcaatcaa
      841 acaaggctgg gagagtgcag aaaatatagt cagtgtgttg accaaggagt ctgggctctg
      901 tacatgtgat caaacaccca agatcattta catttttctg aactaaggct tcttgagtca
      961 gagttgtgtg gaaattatat ttcgcctcaa aataccataa aagaaatgcc actgctgcaa
     1021 gtaatgacaa cattactatt aaagtgccaa tcagtttgag ccttagaaac gttcacccac
     1081 aacaggacat cactgcctca ttaagtcctc agtttctgag gaagacctgt agtaatgtat
     1141 gtccaggata tgatatattt cctttccaca aggtctaaag tagatgatca tgggttttgg
     1201 tgcctgtgtc tcagaatgca tttgccatgg gatctttttt tcatcatttg ttagaggaag
     1261 aaaacaaaaa aataacctgt ggtggtatct gggaaatgag gcattgagca cccattagtg
     1321 tgcatttcat aaggcctctt cctgtgagaa tgctgaggtg gctttttgtc atcttcattt
     1381 gatgtttgtt gaattttgtg gcatttggag aaagcagtca ctgtgcccct gatagaaata
     1441 gaccagtatt ctgaaggttc tcaaactgga taccagatgt tggtgcacaa atcagaagct
     1501 tcctcaactg gaatctaatc cattatgtaa gaaagggtaa ggaatgtgga gactatttga
     1561 gagtataaaa tagttttaaa acattaatat aagggttggg gagttgactc agaacttaag
     1621 agcccttgat acacttccag aggacctaag tttggttcct agaacctatg tcaggctgct
     1681 cataaccatc tgtattttcc tctccagaag atctaataat ttcccatgtg ctaactttat
     1741 gcacactgtg aaattttctt ttgtgttttt acaggttaat ttaaaattag tagtgaatgt
     1801 gttttgtgtt tctttacgta aactatatgg atcctgtgca tataggtgcc agctaagcca
     1861 gaagaggatg tcagatccct tggaactaat attgaaaact gctgtaagct acttaatgac
     1921 tgtttcctat ccactccaga atcatcccag tggatgaatc tattttggag ccggtgtcac
     1981 ccatgtgtga agggtttaac tttcggggtt tccgctggat gaaaaccatg atccacacca
     2041 tcaaggagat taatgcgagg aaagacattt tgcccaacca cactctgggt tatcagatct
     2101 ttgattcctg ctataccatc tccaaagcaa tggaatcatc tttggtgttt cttacagggc
     2161 aggaagaatt caaacccaat tttagaaaca gcactggatc aactctggca gcaatggttg
     2221 gagcaggggg atcatccttg tcagttgctg cttcaagaat tctggggttg tattacatgc
     2281 ctcaggtggg ctatacgtct tcctgttcaa ttcttagtga caaattccag tttccatctt
     2341 atcttcgtgt agtacccagt gataagatcc agtctgaggc catggtgaat cttatcaaac
     2401 actttggttg ggtctgggta ggtgctgttg cagctgatga tgattatgga aaatatggag
     2461 taaaaacttt taaggaaaaa atggagagtg caaacctctg cgttgctttc tctgaaacca
     2521 ttccaaaagt ctactccaat gagaaaatgc aaaaagctat taatgcagta aagaattcca
     2581 ctgcaaaagt cattgtgctt tacacttctg acattgacct cagccccttt gtgttggaat
     2641 tgattcatca taatgtaact gacaggacat ggatagccag tgaagcctgg attacctcag
     2701 ctctcattgc aaagcctgag tattttccct attttggtgg aagtattgga tttgcattac
     2761 caagaactac tatacctgga ctaaaagaat ttctttatga tatacaccct agtaaggatc
     2821 caaatgatgt cttgaccatt gaattctggc aaactgcttt taactgtacc tggcccaaca
     2881 gcagtgtgcc ttacaatgtg gaccatagag tgaatatgac tggaaaagaa gacagattat
     2941 atgacatgtc tgatcagctc tgcactggag aggagaagct ggaggatctg aaaaatactt
     3001 atctggatat gactcagcta agaatcacaa acaatgttaa acaagctgtg tatgctatag
     3061 ctcatgctct ggatctcctc agcagatgtc aagaaggata tggaccattt ggtacaaata
     3121 atgcatgtgc atatataccc acctttgact tctggcagct aatgtactat atgaaggaaa
     3181 ttaaatttaa atcacatgag gaaaagtggg tagttctgga tgataatgga gatttgaagt
     3241 ttggacacta tgatatccta aactggcaat tagatgatag tggagaaatt tcctttgtga
     3301 cagttgggag atttaacttc aaaactgaca tgtttgagct cattattcca acaaattcta
     3361 caatattttg gaacactgaa tcatcaaggc gtccagattc attctgcaca caagtatgtc
     3421 ctccagggac ccggaagggg attcgccagg ggcaacccat atgctgcttt gattgcatcc
     3481 catgtgctga tggatatgtg tcagagaatc caggccaaag ggaatgtgat ccatgtggtg
     3541 aagatgactg gtccaatgca gagaagagca agtgtgtacc aaagcttgtg gaattcctcg
     3601 cttatgagga ggctctgggg ctcacccttg tcatcctttc catatttggg gcactcgtgg
     3661 tcttggcagt cactgttgta tatgtgatat acagacatac accattggtg aaagccaatg
     3721 acagagagtt gagtttcctc attcagatgt ctctggttat cacagtgctc tcatccatgc
     3781 tgttcatagg caagtcatgc aactggacct gcatggcccg ccaggtcact ctggcactgg
     3841 gattttgcct ttgtctgtct tccactcttg gaaagactat ttcactcttt tttgcctaca
     3901 ggatttccaa atccaaaacc cggcttatat ccatgagccc catttatcga aaactaattg
     3961 tgttgatctg tgttgtaggg gagattggtg tatgcacagc ttacttggtg ttggagcctc
     4021 caaggatgtt caagaacatt gaacctcaaa atgtaaagat catctttgaa tgtaatgaag
     4081 ggtctataga gtttctgtgt gctatatttg ggtttgatgt ttttctggct ctactgtgtt
     4141 tcctaacaac ctttgtggct cgcaagctgc cagataacta ttatgaaggg aaatgtatca
     4201 cttttgggat gctggtcttt ttcattgtct ggatctcttt tgtccctgct tacttgagca
     4261 ctaaaggcaa attcaaagta gctgtggaaa tatttgccat tttggcatcc agctatggct
     4321 tgttaggctg tatatttctt cccaagtgtt tcattatctt gctgaggcca aagaggaaca
     4381 cggatgaaac tgttggtgga agagtcccca ctgttgacag gagcatccag ctgacctcag
     4441 cctctgtgag cagtgagctt aacaacaccg cagtgtcaac tgttctagat gagtagagct
     4501 gtgagctcta agtgtcaggc aaagctggaa ggcaacttgc ctcaaccttt ctttgtatgt
     4561 tgtggtgaag cagctgctga tgttgtagca tagtattggc tgtagctctg ttgatgtaag
     4621 tttaacctga taatggtatc tcagtctgtg acatggcatt cagtatagat tagaatgtca
     4681 cttacgtttg aaattggaaa ccatttcatt agattttaaa atagagactc taaataaaca
     4741 caattcatca gacattgtat taaaaatggt tcatgaatat tttttctgtt tttctttttc
     4801 ataagtttac atcaaataaa aatacaggca ggttttaaag agatcttttc tcatactgtt
     4861 gatacctctc tgaaatagtc ctattttttt aaaattatga ctctgaagcc caaggaaatg
     4921 gctgagttgt taagagcctt ggcagctttt caagcagacc caggttaatt tctaacatcc
     4981 tacatggtgg ctcatagctg tttgcaactg gttccagggg caacaattcc ttcttctggg
     5041 agccaggcat gcacatgcct cataataatg catataggta gagtgctatg acaaataaaa
     5101 taaaagaaag gaaaattttt attttgacat cttccccgtg ggcagaagct ttaaagagtt
     5161 cttggaagat aatctgtgct ttcaaagaca caagactgag ggttttgaaa tattgctaga
     5221 attaatgatg ataggtaagc ttctttgaag caaggtatga tcctactcca tgattctctg
     5281 ggcgagagta agtgctaaaa tgtctgagtt tcaaaacatt cctctgagaa ataaatacaa
     5341 agagagttgt gatgccaggc cagtcttaat tagattatat ggtaaagatc tatggcaaac
     5401 atttacctag accaaggctt agaatgcaag actatttttc ttaaaattta ttttatacat
     5461 gtgagtacac tgtcactgtc tttagacaca ctagaagaaa gtatcggatc tcatcataga
     5521 tggttgtaag cctccatgca gttgctgaga attgaactca ggacctctag aagagcagtc
     5581 aatgctcttc actgctgagc catctctcca gccccagtat gcaagacttc ttaaaaatat
     5641 ttcttaatga tacacaacga taaactgtcc ttcgactata tagctatgta attttacttc
     5701 ccacatgcta atgttataga tatgttttca gtctccttga catgaaatgt aaaaaatgac
     5761 ctatatattt ttataagcac atgagttaaa catgtggcaa acacgactta cagacttgtg
     5821 gacagtataa actgcatatg tacatctggc agtaggcata caagaccaga ataggtgtgg
     5881 tttcaagaga actttatctt tgtgatttgt agctcctcaa acttgtctgg gatttcttct
     5941 gtaggtgtgt cagagtagaa agtaaaacca tgatgcataa ctaagcagaa tcatgcatga
     6001 gctttttatt gatttaaaaa caagattatt ctagaccaga tatagataat gacctttcca
     6061 taatttaaat aagagtttat atcaaacctt ggtaaaactc aaagtgatca catttgcttc
     6121 agggtactgc acaccagtgt tttctagata gacatctagt cacctattta ttgcacaata
     6181 ctttcctagt gttcgtcatt ataatctaat tataagaatc attagataag tttatatcac
     6241 aagtataaag tggagaatgt ttgctttcct tggccatcat tgctttattc tttttgtcta
     6301 cttatttgta ttttcattca caggggtata ctctgggaaa gagaaaatga ttttttcaaa
     6361 ccatagagca atgtagaaaa tgaaaaccca taagttaact tatttttcaa ctgttcatgc
     6421 aatttggaag atcttaacaa tatctttcaa ttttcaaaca aagctagaag aggatatatt
     6481 tgtaatgatg tggcttgttt tctattcaaa ctatttcaat ctcagtgtcc tccattcctt
     6541 ttctgagatg ttgaatattg aacatatgct ttctaaaaag ttagtaacag aaactcatgt
     6601 ctctcagtaa tactgtcttt ttcatcttgt agtcatggca atcactttcc taataggcat
     6661 caagttcagt aaatctcaga tataaagtac aaaatattgt tttgacttac acacttaatg
     6721 acaatgtata tgtcccttta tagctttaaa gtgaaacaat ttgagttatc tctcattgat
     6781 ttggcataaa atagttatag aactggctga tggcagttaa aataaaaata tttaatcatc
     6841 tttacttgta tttaatttgt aattacacat caaacattaa actattttgt cacaatatta
     6901 gaagagttct ttggataaat atatcattta aaattatatt tagcattaaa acccagtcaa
     6961 tcttccagca tggagggtag aggcagggtc attggtgcag ttgtgagtag tgaaaaaccg
     7021 caagagtcgt gaagctagca cagctgtttg acccagtcta gaaaagctgc accagatgct
     7081 ttctttgcta ttgtgctgtc ccccactttg ggatttgaat ctgtatgggt tgcatttgtg
     7141 ggagactttt tacactatga tcattcatgc cttttccaag aaaattattt ctgctctaaa
     7201 agatgtaacc ttacctggcc tcactcagga gtcttcattg tgaaaagcaa aaaacagttg
     7261 ggtagcctga gagttctctt ggcacaccta ccactaagca aactcagaaa cgatagattt
     7321 ggcaacacat tagattacag gctctcacct acatgtagtt catagggcac tgccccatga
     7381 aaatgaaatt ttaataacaa agttagtttt ctcaaaataa cctttaacaa tatattaaat
     7441 gttacctgga attagtacaa aagaaatatg agaattttcc aatcataaga agagtggctc
     7501 acattaaatt acagtgaagt ttttaagtaa aaaacctaga gaaatcaaat gaatagaact
     7561 agtctgcaat gtgggcaagc tttcaaactt ttaagctaag ctaacttaca agctgcattt
     7621 caaacactgt tcagtgttta aggcttggga acttatctag agtgactcag gtatttttct
     7681 atttaatgtt tcactgaagt ataaaatgtc atgttataaa tgctcacata gtctaaaatg
     7741 atttgagaat gataataccc attctctctg tagttgtaac actcgtctag ggacaatagt
     7801 gctatctgta tttcttttga aatcaaaagt ttgcttcttc tatggaatct gcatacataa
     7861 aggggcatcc tgattgttaa tctgcattat gaagtatttt atgtgcctgg cccctttaat
     7921 gttcctgtgg tctacagtgt catttgggtc ttggtcttca gggaacagga gaagatctaa
     7981 aaagtcagca gagacttgag aactgggaga aagtagtagg agtaggagag agagtagaga
     8041 tggggaggag gcagacaggg tccaggacgc aggagggtaa ggtcagagaa gagagttgat
     8101 atgagaagaa agaagactga aaagggatag aggagagaag tgagaggaga gaaagaggag
     8161 atttgagcag agtgaagaaa agagacattt gaaattgaaa agacagttgg tgacagttga
     8221 gccaggaaga gctgaactga gccagtgaag atattgttag tgacagaaga atctacaaag
     8281 taacaaaaga gaaaaataaa gaataaaaat tataccagtc agagatgcaa gcttctctag
     8341 ctgtgatctc tgattcattc tccctttacc cgcctctgcc tgatccatat cacctgtgct
     8401 ggaaactgcc tgacttctgg ggctggcccc tagcagctca ccactcttca tttctagctg
     8461 aagagctatt gacagttgat ggcttctggc agaggaagta tatttcttta agggggaaga
     8521 ccctgatagg ttggttatgc tcccgaggat ggtcccacat tcattaatcc atgggaaggg
     8581 caaagtggca ctcaggttat gaaaaatccc acatgaagtt gggagggggt aaaggagtgt
     8641 gttgtgagtc tgggaggatt agcagtataa atggaagata ttatcaaagt atattgtatg
     8701 catctataac atctcaagga attaataaaa tattttaaaa ttaa
//
