LOCUS       NM_001099512            2544 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 2 receptor, 43 (Vom2r43), mRNA.
ACCESSION   NM_001099512 XM_001053623
VERSION     NM_001099512.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2544)
  AUTHORS   Young,J.M. and Trask,B.J.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000001.1.
            
            On Aug 15, 2007 this sequence version replaced XM_001053623.1.
            
            Sequence Note: This record was generated from sequence identified
            by Janet Young (Fred Hutchinson Cancer Research Center).
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-206               JAXUCZ010000001.1  149228250-149228455 c
            207-486             JAXUCZ010000001.1  149212312-149212591 c
            487-1293            JAXUCZ010000001.1  149211120-149211926 c
            1294-1521           JAXUCZ010000001.1  149209937-149210164 c
            1522-1645           JAXUCZ010000001.1  149209387-149209510 c
            1646-2544           JAXUCZ010000001.1  149205927-149206825 c
FEATURES             Location/Qualifiers
     source          1..2544
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..2544
                     /gene="Vom2r43"
                     /note="vomeronasal 2 receptor, 43"
                     /db_xref="GeneID:679593"
                     /db_xref="RGD:1587090"
     CDS             1..2544
                     /gene="Vom2r43"
                     /codon_start=1
                     /product="vomeronasal 2 receptor 43 precursor"
                     /protein_id="NP_001092982.1"
                     /db_xref="GeneID:679593"
                     /db_xref="RGD:1587090"
                     /translation="MIDMFSLILVLLFLKASLLFCTLNDPKCFLRIKDKKNVDGDKEV
                     DCFFSIYAKHGHVKNDFFSGNLDKQLTTKNIHLILSLYFSIEEINSTPQVLPNISLLV
                     KIECNLLADRSKISLSSRKGDYFPNFDCRNQRRYLIVFTGPMWFPTAMLGPLLYISRT
                     PELYYGPFHPLLNTYEQFPYLYQMAIKDTSIAIGMVTLVIYFSWNWVGLMISDDDLGL
                     QFASELREEMQRYDICLAFVTVITYNSKLFLTMAGMYYNQIIMSLAKVVIIYGDIDSF
                     LQVIFRLWQFVDIRRIWIATSQWDIITSNGEFLFNSFHGTLSFSHHYSEISGFKEFIQ
                     TVYPLNYSNTISPAKLWWVNFNCFWPSSNCKKLKKCSRKMLLKWLSNNQFEMAMSETN
                     YNLYNAVYAVAHSLHELILQQANTLSNNVEKELEFDSLQVLSSLKKIQFVNPAGDLVN
                     LNQKENLNVDYDIFYTGDFLQSYGIKVKIGNFFKYLTQPQKLLMFDEMVDWATDIRQT
                     LPSICSTPCNPGFRKSPQEGKAVCCFDCNPCPENEISNMTDMDYCYKCLDNQYANSEG
                     THCLSKTVIFLSYEDPIGVTLACLALCFSALTAVVFGIFLRNQDTLIVKANNRALSYC
                     LLISLIYCFLCSLLFIGKPHMVTCIMQQTIFAVAFTVAVSTVLSKTITVVLAFKFTLP
                     SKKMRWLMTSGTSVLIIPICTMIQLIICGIWLGTYPPYVDSDGHIEHGHILIVCNKGS
                     VTAFYCVLGYLGSIALASFTVAFLARNLPDTFNEAKFLTFSMLVFCSVWLTFLPVYHS
                     TSGKALVIVEVFCILTSTAGLLICIFAPKCYIILLTPKNNSFHTFRHKC"
     exon            1..206
                     /gene="Vom2r43"
                     /inference="alignment:Splign:2.1.0"
     exon            207..486
                     /gene="Vom2r43"
                     /inference="alignment:Splign:2.1.0"
     exon            487..1293
                     /gene="Vom2r43"
                     /inference="alignment:Splign:2.1.0"
     exon            1294..1521
                     /gene="Vom2r43"
                     /inference="alignment:Splign:2.1.0"
     exon            1522..1645
                     /gene="Vom2r43"
                     /inference="alignment:Splign:2.1.0"
     exon            1646..2544
                     /gene="Vom2r43"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgatagata tgttttcctt gattttagtc ttattgttct taaaggcttc cttgcttttc
       61 tgcactttga atgatcccaa gtgcttttta agaataaaag acaagaaaaa cgtggatgga
      121 gataaggaag ttgattgttt tttttccatt tatgctaaac atgggcatgt gaagaatgat
      181 ttctttagtg gaaatctaga caagcagttg acaactaaga acatccattt gattttatct
      241 ctttattttt ctattgagga aatcaatagc acccctcagg ttttacccaa tatatctctg
      301 ctggttaaaa ttgaatgtaa cttattggct gatcggagta aaatcagttt atcctcaaga
      361 aaaggtgatt actttcctaa cttcgactgt agaaaccaga gaagatactt aattgtattt
      421 acaggaccaa tgtggttccc aactgccatg cttggaccac ttctgtatat ctccagaact
      481 ccagagcttt actatgggcc atttcatcct cttctcaata cctatgaaca atttccttat
      541 ctgtatcaga tggctatcaa ggacacatct atagctattg gcatggtgac tttggtgatt
      601 tatttcagct ggaactgggt aggattgatg atttcagatg atgatctagg acttcaattt
      661 gcctctgagt tgagagaaga aatgcaaaga tatgacatct gtttagcctt tgtgactgtt
      721 atcacatata acagcaaatt attcttgaca atggctggca tgtattataa tcaaatcata
      781 atgtctttag caaaagttgt tatcatttat ggtgacatag attcttttct acaagtaatc
      841 tttagactat ggcagtttgt agacattcgg agaatctgga ttgctacatc acagtgggat
      901 ataattacaa gtaatggaga attccttttc aactcctttc acggcaccct cagcttttca
      961 catcattact ctgagatatc tggttttaaa gaatttatac agacagtgta ccctttaaac
     1021 tacagtaaca ctatctctcc tgctaaatta tggtgggtga attttaattg tttttggcca
     1081 tcatctaatt gtaagaaatt gaagaaatgt tcaagaaaaa tgctcctgaa atggttatct
     1141 aacaaccagt ttgaaatggc catgagtgaa acaaattata acctatacaa tgctgtgtat
     1201 gctgtggccc attcactcca tgagttaatt ctgcagcaag caaatacatt gtcaaataac
     1261 gttgagaaag aactggagtt tgattctttg caggtcctct cttccctgaa gaagatccag
     1321 tttgtaaatc ctgctgggga cctagtgaac ctgaatcaga aagaaaactt gaatgtagat
     1381 tatgatattt tctacacagg agatttttta caaagttatg gaattaaagt gaaaatagga
     1441 aactttttca aatacctcac acaacctcaa aaattgctta tgtttgacga aatggtagac
     1501 tgggccacag atattagaca gactctaccc tcaatatgca gtacaccttg caatccagga
     1561 tttagaaaat cccctcagga gggaaaggct gtctgttgct ttgattgtaa cccctgccca
     1621 gagaatgaga tttccaatat gacagatatg gattattgtt acaaatgtct agataatcaa
     1681 tatgccaact cagaaggaac tcattgtctc tccaaaactg tgatattcct gtcttatgaa
     1741 gaccccatag gagtgactct agcatgcttg gccctatgct tttctgctct cacagctgtt
     1801 gtatttggta tctttttaag aaaccaagac actctcattg tcaaggccaa taaccgagct
     1861 ctcagctact gcctgctcat ctcactcatc tattgttttc tttgttctct gctgttcatt
     1921 ggaaaaccac atatggtaac atgcatcatg cagcagacca tatttgcagt tgcgtttact
     1981 gttgctgtct ctactgtttt atccaagaca attactgtgg tactggcctt caagtttact
     2041 cttcctagta aaaagatgag atggctaatg acatcaggaa catcagtctt gatcattccc
     2101 atatgcacca tgatccaact gatcatttgt ggaatctggc tgggaactta tccaccatat
     2161 gttgatagtg atgggcatat tgaacatggc catattttga ttgtttgcaa caaaggttca
     2221 gttactgcct tctattgtgt cctaggatac ttgggttcta ttgcactggc aagtttcact
     2281 gtagcattct tagccaggaa tcttcctgat acattcaatg aagccaagtt cctgacattt
     2341 agcatgctgg tgttctgtag tgtctggctc actttccttc ctgtctacca tagcaccagt
     2401 ggcaaggcct tagtcattgt ggaggtattc tgcatcttga cctccactgc aggactacta
     2461 atctgcatct ttgctccaaa atgctacatt attttgttaa cacctaaaaa caactctttt
     2521 cataccttta ggcacaaatg ctaa
//
