LOCUS       NM_001099476            2598 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 2 receptor, 38 (Vom2r38), mRNA.
ACCESSION   NM_001099476 XM_001080246 XM_218549
VERSION     NM_001099476.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2598)
  AUTHORS   Young,J.M. and Trask,B.J.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000001.1.
            
            On or before Aug 19, 2007 this sequence version replaced
            XM_218549.4, XM_001080246.1.
            
            Sequence Note: This record was generated from sequence identified
            by Janet Young (Fred Hutchinson Cancer Research Center).
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-209               JAXUCZ010000001.1  102495159-102495367
            210-501             JAXUCZ010000001.1  102511945-102512236
            502-1308            JAXUCZ010000001.1  102512570-102513376
            1309-1536           JAXUCZ010000001.1  102514747-102514974
            1537-1660           JAXUCZ010000001.1  102516039-102516162
            1661-2598           JAXUCZ010000001.1  102555769-102556706
FEATURES             Location/Qualifiers
     source          1..2598
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..2598
                     /gene="Vom2r38"
                     /gene_synonym="RGD1565669"
                     /note="vomeronasal 2 receptor, 38"
                     /db_xref="GeneID:308551"
                     /db_xref="RGD:1565669"
     CDS             1..2598
                     /gene="Vom2r38"
                     /gene_synonym="RGD1565669"
                     /codon_start=1
                     /product="vomeronasal 2 receptor 38 precursor"
                     /protein_id="NP_001092946.1"
                     /db_xref="GeneID:308551"
                     /db_xref="RGD:1565669"
                     /translation="MLWIFTFGFLYIPNFLCALTDNECYVTSKDYFYHEGDVTIGAFF
                     PLHILYTGNKVSHKYEPYNLQDLHIQYKFKNYQFVLALMFAIEEINRNPHLLPNTTLG
                     YDIYNIPYTEKNILYSAFLWHTGIINPLPNCDCGHKRKSPAVLTGPSWSASAHIGTLL
                     QLYKIPQLTFGPFDSILNDQGQFNSLYQMAPKDTSLSLAIVLLMLHFSWSWVGLMLPD
                     DHRGTQFLSDLRENMESNGICIAFLKMIPGTWNAFSNALWKNMEKIEESSANVIVIYG
                     DIISIQGLMRHVAQLLVTWKVWVLNSSWDIDSHSDYFMLESFHGSLIFSHHHEEMIEF
                     MNFIQTVNPYKYPEDNYLPKFWFLFFKCPFSKFDCHLLENCQPNASLELLPRHIFDPT
                     MSEEGYNIYNAVYAVAYSLHEINLQQTQTQPYTNEKGMVFSPWQLLPFLKTTIKKSHV
                     RGHTVMVGGRNLNTKYDILNFWNFPSGLGLKVKVGTYSLSAHQGVHFSLCEEMIQWPT
                     KFTKIPQSVCSESCRPGFRKAAQEGKAVCCFNCTPCAENEISNETDMDQCLKCPESHY
                     ANSEKNHCLRKSVSFLAYEEPLGMALTITALGFSVLTAVVLVVFVKHRDTPIVKANNR
                     SLSYILLLTLFICFLSSLLFIGQPSTATCILQQTAFGILFTVALSTVLAKAITVVIAF
                     KATVPARMVRWLMVSRAPNFIIPFCTLIQIIICGIWLVTSPPFIDQDTHAERGHIIIV
                     CNMGSIVAFHTVLGYLCSLALGSYAMAFLSRNLPDTFNEAKFLSFSMQVFFCVWITFL
                     PVYHSTKGKVMVSMEIFSTLASSIALLGLIFAPKCYIILLRPEKNSCIDIRHKRHSRR
                     NIHLHLVKN"
     exon            1..209
                     /gene="Vom2r38"
                     /gene_synonym="RGD1565669"
                     /inference="alignment:Splign:2.1.0"
     exon            210..501
                     /gene="Vom2r38"
                     /gene_synonym="RGD1565669"
                     /inference="alignment:Splign:2.1.0"
     exon            502..1308
                     /gene="Vom2r38"
                     /gene_synonym="RGD1565669"
                     /inference="alignment:Splign:2.1.0"
     exon            1309..1536
                     /gene="Vom2r38"
                     /gene_synonym="RGD1565669"
                     /inference="alignment:Splign:2.1.0"
     exon            1537..1660
                     /gene="Vom2r38"
                     /gene_synonym="RGD1565669"
                     /inference="alignment:Splign:2.1.0"
     exon            1661..2598
                     /gene="Vom2r38"
                     /gene_synonym="RGD1565669"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgctctgga tttttacctt tgggttccta tatattccca attttttgtg tgcccttact
       61 gacaatgaat gctatgtaac aagcaaggat tatttttacc atgaaggaga tgtgacaatt
      121 ggtgcatttt tccctcttca tattttgtac acaggcaaca aagtttctca taaatatgaa
      181 ccatacaatt tacaagatct tcatatacag tataagttta agaactacca gtttgttctg
      241 gccctgatgt ttgccattga ggagatcaac agaaaccctc atcttctacc caatacaact
      301 cttggatatg atatctataa tattccatac actgaaaaga atattcttta tagtgccttt
      361 ctttggcata cagggataat caatcccctt cctaactgtg actgtggaca caagagaaag
      421 tcacctgctg tactcacagg accatcatgg tcagcatctg cccatattgg aacactgcta
      481 caactctaca aaatacctca gctcactttt gggccttttg attctatctt gaatgaccaa
      541 ggtcaattta attcactcta tcagatggct ccaaaggaca catctctgtc acttgccata
      601 gtccttttga tgcttcattt cagctggtcc tgggttgggc tgatgctccc agatgaccac
      661 agaggtactc agtttctatc agacttgaga gaaaatatgg agagcaatgg catctgcata
      721 gcctttttga aaatgatccc tggcacatgg aatgcatttt ccaatgcatt atggaaaaat
      781 atggagaaga ttgaggaatc atcagcaaat gtaatagtta tttatgggga tattatttct
      841 atacaagggt taatgcggca tgttgcacaa ctattagtta catggaaagt ttgggtcttg
      901 aactcttcgt gggatattga tagccattct gattatttta tgttagagtc atttcatgga
      961 agtctcattt tttcacacca ccatgaagag atgattgagt ttatgaattt tattcaaaca
     1021 gttaatccct acaaataccc agaggacaat tatcttccta agttttggtt tttgtttttc
     1081 aagtgtccat tttctaagtt tgactgtcat cttttggaga actgccaacc caatgcttct
     1141 ttggaattac ttcccagaca catttttgac cccactatga gtgaagaggg ctacaatata
     1201 tacaatgctg tgtatgctgt ggcctatagt ctccatgaga taaatcttca acaaacacag
     1261 acacaaccat ataccaatga aaaaggaatg gtattctccc cctggcagct tctccctttc
     1321 ttaaagacca cgataaaaaa aagtcatgtg agaggacaca cagtaatggt tgggggaaga
     1381 aacttaaata caaagtatga cattcttaat ttctggaatt ttccaagtgg tcttggatta
     1441 aaggtgaaag taggaaccta ttctctaagt gctcaccagg gtgtacattt ctctttatgt
     1501 gaagagatga tacaatggcc tacaaagttt acaaagattc ctcagtctgt gtgcagtgag
     1561 agctgtaggc ccggattcag gaaagctgcc caggaaggca aggctgtctg ctgctttaat
     1621 tgtactcctt gtgcagaaaa tgagatttcc aatgagacag atatggatca gtgtctgaag
     1681 tgcccagaaa gtcactatgc caactcagag aagaaccact gcctccggaa atctgtgagc
     1741 tttttggcct atgaagagcc actggggatg gcactcacca tcacagcact gggcttctct
     1801 gtactcacag ctgtggttct tgttgtcttt gtgaagcaca gagacacacc cattgtcaag
     1861 gctaacaacc ggtctctcag ctatatcctg ctattgacac tcttcatctg tttcctcagt
     1921 tccttgcttt tcattggaca gcccagcaca gccacttgca tcttgcagca gacagcattt
     1981 ggaattttgt ttactgtggc tctctccaca gtgttggcca aagccattac agtggttatt
     2041 gcattcaagg ccactgttcc agctagaatg gtgaggtggt taatggtatc aagagcccct
     2101 aatttcatca ttcccttctg cacactgatc caaattatta tctgtggaat ctggttagtt
     2161 acctctccac ccttcattga tcaagatact catgctgagc gtggtcacat catcattgtg
     2221 tgcaacatgg gatcaatagt tgccttccac actgtcctgg ggtatctctg ctccttagca
     2281 cttgggagct acgccatggc cttcttgtcc aggaatctgc ctgacacatt caacgaagcc
     2341 aagttcctgt cattcagcat gcaggtattc ttctgtgttt ggatcacgtt cctccctgtt
     2401 tatcacagca caaagggaaa ggtcatggtg tctatggaaa tattctccac cttggcttcc
     2461 agtatagcac tccttggatt gatttttgca cccaagtgct acattatttt gttaaggcca
     2521 gagaaaaact cctgtattga tatcaggcac aaaagacatt caagaaggaa tatccattta
     2581 catttagtta aaaattaa
//
