LOCUS       NM_001099473            2103 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 2 receptor, 35 (Vom2r35), mRNA.
ACCESSION   NM_001099473 XM_001063172 XM_218287
VERSION     NM_001099473.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2103)
  AUTHORS   Young,J.M. and Trask,B.J.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000001.1.
            
            On or before Aug 19, 2007 this sequence version replaced
            XM_218287.4, XM_001063172.1.
            
            Sequence Note: This record was generated from sequence identified
            by Janet Young (Fred Hutchinson Cancer Research Center).
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-801               JAXUCZ010000001.1  82299086-82299886   c
            802-1038            JAXUCZ010000001.1  82289104-82289340   c
            1039-1162           JAXUCZ010000001.1  82286019-82286142   c
            1163-2103           JAXUCZ010000001.1  82282600-82283540   c
FEATURES             Location/Qualifiers
     source          1..2103
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..2103
                     /gene="Vom2r35"
                     /gene_synonym="RGD1559147"
                     /note="vomeronasal 2 receptor, 35"
                     /db_xref="GeneID:292615"
                     /db_xref="RGD:1559147"
     exon            1..801
                     /gene="Vom2r35"
                     /gene_synonym="RGD1559147"
                     /inference="alignment:Splign:2.1.0"
     CDS             286..2103
                     /gene="Vom2r35"
                     /gene_synonym="RGD1559147"
                     /note="putative zinc finger protein"
                     /codon_start=1
                     /product="vomeronasal 2 receptor, 35"
                     /protein_id="NP_001092943.1"
                     /db_xref="GeneID:292615"
                     /db_xref="RGD:1559147"
                     /translation="MQKCTARVVLVFLSNSNFQLILHGLLAVPVSGQVWVSKGTLHMA
                     LALTVPGVFQVLQGTFGLLYHSSRAIGFPEFLTHLSPSQTPEDMFIKKFWEFTFDCTW
                     PYQNSTVTEGVQICSGNESLKNKPHPFPEVSKIDAAYTAVYSIAHALHDMVASAHQDG
                     KGTNSQDFHHWQLLHALRKVHFKTPDRSEIMFDANGDLVTKFDIFQGQKNPNGVFHLV
                     HVGMIDPQASSGNKMMIQLKKDLQVSSLNAEITVPPSICSESCLPGFSQVPRLGAPHC
                     CFDCSPCPEGQFADQRDMKRCLLCPKEQYSSNTRDHCLPRTEIFLAFEEPLGFILALM
                     AILLAGLALLVLGVFLKHRDIPVVRANNRTLSYFLLISLSLCSLCSLLFLGRPTVTTC
                     LLRQTTFAVVFTVAVSSVLAKTVTVVLAFRVTKPGSRIQVCLSPGASTSVILIASLIQ
                     TVLCGVWLATSPPFPERDMISEPRHIVIQCQEGSGATFFCVLGFLGFLAVGTFSVAFL
                     ARDLPDVFNETKFLTFSMLLFCSVWTAFLPLYHSARGKSTVAVEIFSILASTDGLLCG
                     IFIPKCYIILLKPEKNTPAWLRQGRCAHQDRQFSMLHRR"
     exon            802..1038
                     /gene="Vom2r35"
                     /gene_synonym="RGD1559147"
                     /inference="alignment:Splign:2.1.0"
     exon            1039..1162
                     /gene="Vom2r35"
                     /gene_synonym="RGD1559147"
                     /inference="alignment:Splign:2.1.0"
     exon            1163..2103
                     /gene="Vom2r35"
                     /gene_synonym="RGD1559147"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cagatcagct attcatcttc cctacctagt ctgagtgaca agatccagtt tccgtccttc
       61 cttcggacac tgcctagtga tctcacatcc tgtcatgcag ttactcagct gataattcac
      121 tttcagtggt cctgggtgat cattctggcc caagatgatg actttggaga gcaggccagt
      181 tctctggcca ctcagcagct gagtgcagct ggtgtgtgca ttgagtttca ccttcatgtc
      241 ccttcccaac agaccttggg gaagattgga gagactgtcc agaagatgca gaaatgtaca
      301 gctagggttg ttctggtttt cttaagcaat tcaaatttcc agctcatctt gcatggctta
      361 ctggctgtcc ctgtctcagg tcaggtgtgg gtcagcaaag gcactctgca catggcactt
      421 gctctgaccg ttccaggcgt tttccaagtg ttgcaaggca catttggcct tctgtatcac
      481 agcagcaggg caattggctt ccccgagttc cttactcact tgagccccag ccagacccca
      541 gaagacatgt ttataaagaa gttctgggag ttcacctttg attgtacatg gccataccag
      601 aacagcacag tgacagaggg tgtccagatc tgctcaggca atgagagtct gaagaacaag
      661 cctcatcctt tcccagaagt gagtaaaatt gatgctgctt acacagctgt ctacagcatt
      721 gcccatgcct tgcatgatat ggtagccagt gcgcaccagg atgggaaagg tacaaactcc
      781 caggacttcc atcactggca gctgctccat gcgctccgaa aggtacactt caagactcct
      841 gatcgaagtg agattatgtt tgatgccaat ggagatttgg tgacaaaatt tgatattttt
      901 caagggcaga agaaccccaa tggtgtattt cacttggtcc atgtaggcat gatagaccct
      961 caagcctctt cagggaacaa aatgatgatc caattgaaga aggatctcca agtgagttcc
     1021 ctgaatgcag aaataactgt gcccccctcc atctgcagtg agagctgcct tccagggttt
     1081 agccaagtgc ccagactggg agccccccac tgctgttttg attgcagtcc atgccctgaa
     1141 ggacagtttg cagaccaaag agacatgaag agatgtcttc tgtgtcccaa ggagcagtac
     1201 tcaagcaata ccagagacca ttgcctcccc aggacagaga tcttcctggc ctttgaggaa
     1261 ccattgggat tcatattggc tttgatggca atcttgctgg ctggtctggc tctcctggta
     1321 cttggagttt tcctgaagca tcgagacata cctgtggtca gggccaacaa cagaactctc
     1381 agctacttcc tcctgatctc tctttccctc tgttccctct gttccttgct tttccttggg
     1441 agacccactg tcaccacctg tctcctccgc cagaccacgt ttgctgtggt gttcacagtg
     1501 gctgtctcct ctgttctggc caagactgtc acagtagtcc tggccttcag agtcaccaag
     1561 ccaggaagca ggattcaggt atgcctgagc cctggtgctt caacctcagt catcctcatt
     1621 gcttccttaa tacagactgt tctttgtgga gtgtggttgg ctacctcccc accattccca
     1681 gagagggata tgatctcaga gccccggcac attgtgatcc agtgccagga gggttctggt
     1741 gccaccttct tctgtgttct gggcttctta ggtttcctgg cagtgggtac cttctctgtg
     1801 gcttttctgg ccagggacct accagatgtc ttcaatgaga ccaagttcct cactttcagc
     1861 atgctgctct tctgcagtgt ctggacagcc ttcctgcccc tgtaccacag tgcccgggga
     1921 aagtccactg tggcggtaga gatcttttcc atcctggcct ccactgatgg acttttgtgt
     1981 ggcatcttca tccccaaatg ctacatcatc ttgttgaaac cagaaaagaa tacccctgcc
     2041 tggctaaggc aaggccgctg tgcacatcaa gacaggcagt tttcgatgct ccacagaagg
     2101 tga
//
