LOCUS       NM_001099460            2548 bp    mRNA    linear   ROD 17-JUL-2023
DEFINITION  Rattus norvegicus vomeronasal 2 receptor, 3 (Vom2r3), mRNA.
ACCESSION   NM_001099460 XM_577675
VERSION     NM_001099460.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2548)
  AUTHORS   Young JM and Trask BJ.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000001.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001099460.4.
            
            On Apr 6, 2023 this sequence version replaced NM_001099460.2.
            
            Sequence Note:.
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on manual assertion, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-206               JACYVU010000001.1  76909-77114
            207-489             JACYVU010000001.1  79753-80035
            490-1293            JACYVU010000001.1  80483-81286
            1294-1518           JACYVU010000001.1  82137-82361
            1519-1642           JACYVU010000001.1  83590-83713
            1643-2548           JACYVU010000001.1  84879-85784
FEATURES             Location/Qualifiers
     source          1..2548
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1p13"
     gene            1..2548
                     /gene="Vom2r3"
                     /gene_synonym="RGD1565892"
                     /note="vomeronasal 2 receptor, 3"
                     /db_xref="GeneID:502213"
                     /db_xref="RGD:1565892"
     CDS             1..2526
                     /gene="Vom2r3"
                     /gene_synonym="RGD1565892"
                     /note="vomeronasal type-2 receptor 26-like; vomeronasal 2
                     receptor 3"
                     /codon_start=1
                     /product="vomeronasal 2 receptor, 3 precursor"
                     /protein_id="NP_001092930.2"
                     /db_xref="GeneID:502213"
                     /db_xref="RGD:1565892"
                     /translation="MKKLCAFTIAFFPLKFCLILCSLTEPNCFWRIKKIEVYDGDLQN
                     DCGFVLFTLESPIEENFYNHIINFRIPARKYEFFLVMFFATDEINKNPYLLSNMSLIF
                     SFIFGMCEDTMGVLDKAYLHQNNYFDLLNYNCGRKKRCDVKLTGPSWKTSLKLSVNSR
                     APKIFFGPFNPNLSDHDQFPYIYQIATKDTYLLHGMVSLMFHFEWTWIGLVITDDDQG
                     IQFHSDLREEMQRHAICLAFVIMIPESIKLYNTKFKIYDQQLMTSSAKVTIIYGKMIS
                     TLGLSFRRWAYLVARRIWITTSKLDDITYDKDFSLDFFHGTVIFVHHHNDIATFRNFM
                     QTINTSKYPVDISQSMGQWNHFNCSISKNKKKMDFFMLKNPLEWLTQHTFDMVLSEEG
                     YNLYNAVYAVAHTYHELIFQQVESQEMAKPKGLFTDCQKVASLLKTRVFTNPVGELVN
                     MNHKENQCAKYDIFIIWNFPKGLGLKVKIGSYFPCLQQSQHLHISEDWEWVTGETLVP
                     SSVCSETCTAGFRKSHQKQTADCCFDCVQCQENEIANDTDMEQCVRCPDDSYANLEQT
                     ECLQRVVTFLAYEDPLGMALGCMALSFSAITILVLVTFVKYRDTPIVKANNRILSYIL
                     LISLVFCFLCSLLFIGHPNQATCILQQATFAIFFTVAISTVLAKTITVVTAFKLTTPG
                     RRIRKMMIKGATNLLIPICTLIQLVLCAIWLVTSPPFIDRDIQSEHGKVIIICNKGSV
                     TAFHFVLGYLSSLALGSFTVAFLARNLPDRFNEAKFLTFSMLVFYSVWITFLPVYHST
                     RGKVMVIVEVFSILASSAGLLGCIFFQKCYVLLVRPDLNVLQK"
     exon            1..206
                     /gene="Vom2r3"
                     /gene_synonym="RGD1565892"
                     /inference="alignment:Splign:2.1.0"
     exon            207..489
                     /gene="Vom2r3"
                     /gene_synonym="RGD1565892"
                     /inference="alignment:Splign:2.1.0"
     exon            490..1293
                     /gene="Vom2r3"
                     /gene_synonym="RGD1565892"
                     /inference="alignment:Splign:2.1.0"
     exon            1294..1518
                     /gene="Vom2r3"
                     /gene_synonym="RGD1565892"
                     /inference="alignment:Splign:2.1.0"
     exon            1519..1642
                     /gene="Vom2r3"
                     /gene_synonym="RGD1565892"
                     /inference="alignment:Splign:2.1.0"
     exon            1643..2548
                     /gene="Vom2r3"
                     /gene_synonym="RGD1565892"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaagaagc tgtgtgcttt cactattgcc ttttttcccc tgaagttttg tctcattttg
       61 tgcagtttga ctgaacccaa ttgcttttgg aggataaaga agatcgaagt ttatgatgga
      121 gatttgcaaa atgactgtgg ttttgtcctt tttacacttg agagccctat tgaagaaaat
      181 ttttataatc acattattaa ttttaggata ccagcaagaa aatatgaatt ttttctggta
      241 atgttttttg ctactgatga gatcaacaag aatccttatc ttttatccaa catgtctttg
      301 atattttcct tcatttttgg tatgtgtgaa gatacaatgg gagttctgga taaagcatat
      361 ttacatcaga acaactattt cgatctactt aattataact gtggaagaaa gaaacgttgt
      421 gatgtaaaac ttacaggacc atcatggaaa acttccttaa aactttcagt taattcaagg
      481 gcaccaaaga ttttctttgg accatttaat cctaacctga gtgaccatga ccagtttccc
      541 tatatctatc agatagcaac caaggacaca tatttgctcc atggcatggt ctccttgatg
      601 tttcattttg aatggacttg gataggactg gtcatcacag atgatgacca aggtattcag
      661 tttcactcag acttgagaga agaaatgcaa aggcatgcga tctgtttagc ttttgtgatt
      721 atgatcccag aaagcattaa gttatacaac acaaagttta agatatatga ccaacaactt
      781 atgacatctt cagcaaaggt tacaatcatt tatggcaaaa tgatctccac tctaggactc
      841 agctttagaa gatgggcata tttagttgca cggagaatct ggatcacaac ctcaaaattg
      901 gatgacatca catatgataa agatttcagc cttgatttct tccacgggac tgtcattttt
      961 gtccaccacc acaatgacat cgctacattt agaaatttta tgcaaacaat aaacacatcc
     1021 aagtatccag tagatatttc tcagtctatg gggcagtgga atcattttaa ctgttcaatc
     1081 tcaaagaata agaagaaaat ggattttttt atgttgaaaa acccattgga atggttaaca
     1141 cagcacacat ttgacatggt cctgagtgaa gaaggttaca atttgtataa tgctgtgtat
     1201 gctgtggccc acacctatca cgaactcatt tttcaacaag tagagtctca ggaaatggcc
     1261 aaacccaaag gactattcac tgactgtcag aaggtggctt ctttgctgaa aactagggta
     1321 tttactaacc ctgttggaga gctggtgaac atgaatcata aggaaaatca gtgtgccaag
     1381 tatgacattt tcatcatttg gaattttcca aaaggccttg gattaaaagt gaaaatagga
     1441 agctattttc cttgtttgca acagagtcaa catcttcata tatctgaaga ctgggaatgg
     1501 gttacaggag aaacattggt tccctcctca gtgtgtagtg agacatgtac tgcagggttc
     1561 agaaaaagtc atcagaaaca aacagccgac tgctgctttg attgtgtcca gtgccaagaa
     1621 aatgagattg ccaatgatac agatatggag cagtgtgtga gatgtccaga tgattcatat
     1681 gccaacttag aacaaaccga gtgcctccaa agagttgtga catttctcgc ttatgaagat
     1741 ccattgggga tggctctagg ctgcatggcc ctgtcctttt cagccatcac aattctagta
     1801 ctagtcactt ttgtgaagta cagggatact cccattgtga aagccaataa ccgtattctc
     1861 agctacatcc tgctcatatc tctagtcttc tgttttctct gctcattgct cttcattgga
     1921 catcccaacc aggccacctg catcctgcag caggccacgt ttgcaatatt tttcactgtt
     1981 gctatttcta ctgtgttggc caaaacaata actgtggtca cagctttcaa gctcactact
     2041 ccagggagaa ggataagaaa gatgatgata aaaggggcaa ctaacttgct cattcccatt
     2101 tgtaccctaa tccaacttgt tctctgtgca atctggttgg tgacatctcc tccatttatt
     2161 gacagagata tacaatctga acatgggaag gtaatcatca tttgcaacaa aggctcagtc
     2221 actgccttcc actttgtctt gggatatttg agctccttgg ctctggggag cttcactgtg
     2281 gctttcttgg ctaggaacct tcctgacaga ttcaatgagg ccaagttcct aacattcagc
     2341 atgttggtgt tctacagtgt ttggatcacc ttcctccctg tctaccacag caccaggggg
     2401 aaggttatgg ttattgtgga ggttttctcc atcttggctt ctagtgcagg gttgctaggg
     2461 tgtatatttt tccaaaagtg ttatgttctt ttagttcgac cagacttaaa tgttcttcag
     2521 aaataaaaag ataaattgct ttattgaa
//
