LOCUS       NM_001099488            2562 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 2 receptor, 12 (Vom2r12), mRNA.
ACCESSION   NM_001099488 XM_001074831
VERSION     NM_001099488.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2562)
  AUTHORS   Young,J.M. and Trask,B.J.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Feb 3, 2021 this sequence version replaced NM_001099488.2.
            
            Sequence Note: This record was generated from sequence identified
            by Janet Young (Fred Hutchinson Cancer Research Center).
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-197               JAXUCZ010000001.1  70695506-70695702
            198-489             JAXUCZ010000001.1  70697567-70697858
            490-1290            JAXUCZ010000001.1  70698680-70699480
            1291-1518           JAXUCZ010000001.1  70706627-70706854
            1519-1642           JAXUCZ010000001.1  70715072-70715195
            1643-2562           JAXUCZ010000001.1  70717294-70718213
FEATURES             Location/Qualifiers
     source          1..2562
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..2562
                     /gene="Vom2r12"
                     /note="vomeronasal 2 receptor, 12"
                     /db_xref="GeneID:690566"
                     /db_xref="RGD:1594694"
     CDS             1..2562
                     /gene="Vom2r12"
                     /codon_start=1
                     /product="vomeronasal 2 receptor, 12 precursor"
                     /protein_id="NP_001092958.3"
                     /db_xref="GeneID:690566"
                     /db_xref="RGD:1594694"
                     /translation="MFTLILSFLLLNIPLQVTGFIYPTCSWRIKENKDKSGNERIGCF
                     FLIQAVQKPVEKEYFSHFFNTQKHTEIHKYSLVLAFSMIEVNRNPDLLPNMSLVFSFR
                     EIICGWQPELSIFIEVNLDDYGVLPNYTCKDDSLCGVVLTGLNWAPTLLLYTILNNFK
                     SQQFPHLTYGHYHPVPSDHENFPYLYQMASDDTSLALALVSFIIHFSWNWIGLAFSDN
                     DQGTHFLSYLKRGMEKNAVCLAFVSMIPVDMHLYMSRAEVYYSQILTSSANVVIIYGD
                     TGSTLAVSFRMWESLGLQRLWITTTQLDVTPSMKENIYGLFAFGHHHGVISGFKNFVQ
                     TLNPVTYSNDNLAKLEWMHFNCEVSASKWKTLKNFSSNHSLEWLMENTFEMTFSEGSY
                     NIYNAVYTVAHVLHKMTFQKFHNLPNAKGKVQNYVCNKLGAPLRKIHFTNPVGDRINM
                     NREDKLQEEYDIFYIWNFPQGLAFKVKIGLFSPYFINGQQLHLSGDMIEWARGSTQMP
                     TSVCSADCGPGFRKFRKKEMSACCFDCSPCPENEISNETNMEMCVLCPEDKYANTGQN
                     DCIPKALIFLSYEDHLGMALSLMALGFSAFTAVVLGIFVKHHSTPIVKANNRTLTYIL
                     LLSLIFCFLCPLLFIGHPDSVTCILQQITFGVLFTVAISTVLAKTITVILAFKVTAPQ
                     RMMKYFLLSGVSMYIIPICTLIQVIVCAVCLGVSPPSVDIDAQSEHGHIIVVCNNGSV
                     TCFYSVLGYLACLTFVSFTLAFLSRNLPGAFNEAKSITFSMLVVCSVWVTFLPVYHST
                     KGKIMVAVEIISILASSSGMLVCIFIPKCYIILFRPEKNSLKMIREKSPSHTHIS"
     exon            1..197
                     /gene="Vom2r12"
                     /inference="alignment:Splign:2.1.0"
     exon            198..489
                     /gene="Vom2r12"
                     /inference="alignment:Splign:2.1.0"
     exon            490..1290
                     /gene="Vom2r12"
                     /inference="alignment:Splign:2.1.0"
     exon            1291..1518
                     /gene="Vom2r12"
                     /inference="alignment:Splign:2.1.0"
     exon            1519..1642
                     /gene="Vom2r12"
                     /inference="alignment:Splign:2.1.0"
     exon            1643..2562
                     /gene="Vom2r12"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgttcactc tgattttgtc tttcttgctc ctgaacattc cacttcaggt gactggtttt
       61 atttatccca cctgctcttg gagaataaaa gagaataaag acaagagtgg aaacgagaga
      121 attggctgtt tcttcttgat tcaagcagta caaaagcctg tggagaaaga gtatttcagt
      181 cattttttca acacacaaaa acacactgaa atccacaagt attctcttgt cttggctttt
      241 tccatgattg aagtcaacag gaaccctgat cttttgccaa atatgtctct agtattttca
      301 tttcgagaaa taatttgtgg ttggcaaccc gaattatcaa ttttcattga agtgaattta
      361 gatgattatg gagttctccc taattatacc tgtaaagatg acagtctgtg tggagtggta
      421 cttacaggat taaactgggc accaactctg ttactttata caatcctaaa caacttcaaa
      481 tctcagcagt tccctcatct tacttacgga cactatcatc ctgttccgag tgatcatgaa
      541 aattttccct atctatatca gatggcctct gatgatacat ctctagccct tgccctggtc
      601 tcattcataa ttcattttag ttggaactgg atagggttgg ccttctcaga caatgatcaa
      661 gggacccatt ttctctctta tttgaaaaga gggatggaaa aaaatgcagt ctgtcttgct
      721 tttgtgagca tgatcccagt cgatatgcat ttatacatgt caagagctga agtgtattac
      781 agccaaatct tgacatcatc cgcaaatgtt gttatcattt atggcgacac aggcagtact
      841 ttagctgtga gttttagaat gtgggaatct ctaggtttac agagattatg gatcaccacc
      901 acacagttgg atgtcactcc tagcatgaaa gaaaatatat atgggttatt tgcttttgga
      961 caccaccatg gtgtgatttc tggttttaaa aattttgtcc agacattgaa tcctgtcaca
     1021 tactcaaatg acaatctggc aaagctggaa tggatgcact ttaactgtga agtctcagca
     1081 tcgaaatgga agacactgaa gaacttttca tctaatcact cactggaatg gctaatggaa
     1141 aatacttttg aaatgacctt tagtgaagga agttataaca tatacaatgc tgtgtatact
     1201 gttgcgcatg tacttcataa gatgactttt caaaagtttc ataatctgcc caatgccaaa
     1261 gggaaagtac aaaattatgt ctgcaataag ctgggtgccc ctctgagaaa gatccacttc
     1321 actaatccag ttggggacag aataaatatg aatcgagaag acaaactgca ggaagaatat
     1381 gacattttct acatttggaa ttttccacag ggacttgcat ttaaagtgaa aataggacta
     1441 tttagtccct attttataaa tggtcaacag ttacatttat ctggagatat gatagagtgg
     1501 gcaagaggaa gtacacagat gccgacctct gtgtgcagtg ctgattgtgg tccaggattt
     1561 agaaaattca gaaagaagga aatgtcagcc tgttgttttg attgcagtcc ctgcccagaa
     1621 aatgaaattt ctaatgagac aaacatggag atgtgtgtcc tgtgcccaga ggacaaatat
     1681 gccaacacag gacagaatga ctgcattcca aaagctctta tctttctcag ttatgaagac
     1741 cacctgggga tggcactttc tttaatggcc ctgggcttct ctgcattcac agctgtggtt
     1801 cttggcatct ttgtgaagca ccacagtact cccattgtta aggccaataa cagaactctc
     1861 acttacatct tgctcctctc cctcattttt tgtttccttt gccccttgct cttcattggg
     1921 catccagact cggtcacatg catcctacag caaatcacat ttggagttct attcaccgtg
     1981 gctatttcca cagtgttagc caaaacaatt actgttattc tggcattcaa agtcacagcc
     2041 cctcaaagaa tgatgaagta ctttcttctt tcaggagtat ctatgtacat cattcccatc
     2101 tgcactctca tccaagttat tgtctgtgca gtctgtttag gagtttctcc tccttctgtt
     2161 gacattgatg ctcaatctga gcatggtcac attatcgttg tttgcaacaa tggttcagtt
     2221 acttgttttt acagtgttct gggatacctg gcctgcctga cctttgtgag cttcactctg
     2281 gctttccttt ccagaaacct gcctggtgcc ttcaatgaag ccaagtcaat aacattcagc
     2341 atgctggtgg tctgcagtgt ctgggttact ttcctccccg tttaccatag cacaaaaggc
     2401 aagatcatgg tggctgttga gatcatttcc attttggctt ccagttcagg gatgctggta
     2461 tgcattttca ttcccaaatg ttacataata ctttttagac cagaaaaaaa ttctcttaaa
     2521 atgatcaggg agaaatcacc ttcccatact cacatttcat aa
//
