LOCUS       NM_001099470            2595 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 2 receptor, 11 (Vom2r11), mRNA.
ACCESSION   NM_001099470 XM_001058654 XM_218020
VERSION     NM_001099470.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2595)
  AUTHORS   Young,J.M. and Trask,B.J.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000001.1.
            
            On or before Aug 19, 2007 this sequence version replaced
            XM_218020.3, XM_001058654.1.
            
            Sequence Note: This record was generated from sequence identified
            by Janet Young (Fred Hutchinson Cancer Research Center).
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-224               JAXUCZ010000001.1  68191440-68191663   c
            225-519             JAXUCZ010000001.1  68185488-68185782   c
            520-1326            JAXUCZ010000001.1  68179843-68180649   c
            1327-1527           JAXUCZ010000001.1  68178887-68179087   c
            1528-1651           JAXUCZ010000001.1  68176269-68176392   c
            1652-2595           JAXUCZ010000001.1  68171875-68172818   c
FEATURES             Location/Qualifiers
     source          1..2595
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..2595
                     /gene="Vom2r11"
                     /gene_synonym="RGD1563778"
                     /note="vomeronasal 2 receptor, 11"
                     /db_xref="GeneID:292417"
                     /db_xref="RGD:1563778"
     CDS             1..2595
                     /gene="Vom2r11"
                     /gene_synonym="RGD1563778"
                     /codon_start=1
                     /product="vomeronasal 2 receptor 11"
                     /protein_id="NP_001092940.1"
                     /db_xref="GeneID:292417"
                     /db_xref="RGD:1563778"
                     /translation="MKMFSWIFITSFLQTPYLVFTFNLSICYYLITEDFHHEGDLMIG
                     AFFPVHTYYTVNKIPNVQFPNIYYYQDYYLQFNFKNYQYVLALEFAIEEINRNPNLLP
                     NLTLGFDFYNVKFTEKETLMNVCMWLTAHKRGKVLPNYNCEEKNFTAAFTGTSWTTSA
                     HIGTLLQLFRFPQLSIGPYDTALNDHGQYSSLYQMATKDTSLSHGIVSLMLYFRWSWV
                     GLLLPDDHKGNKVLSEFRDEMERERVCIAFVKMIPTTWTLYFNKQWKNMEEIEESSTN
                     VIIIYGDVDSLQGLMRNIGQRLLTGKVWVMNFEQDITDHADYFLLDSFHGSFIFTQHY
                     GESFEFTKFIQTVNPYKYPEDIYLPKMWHYFFKCSYSEVDCKLLDNCQANATLNVLPR
                     HIFDVSMSKESYNIYNAVYAVAHSLHEITLKQVQMQPCKNGEELLFYPWQINSFLRKN
                     MGLDWRQKRNEEYDILNLWNFPKGLGLKIKIGKYSENAPDGQQLTLSDQMIQWPEKFS
                     EIPQSVCSESCGPGFRKVTLEGQAVCCYNCTPCAENEISNETDVDHCVKCPESYYANT
                     EKNHCLQKAQSFLAYEDPLGMALTSISLLFSALTVIVVGIFVRHRHTPMVKANNRALS
                     YTLLISLNFCFLCSLNFIGQPNTATCILQQTIFGVAFTVALATVLAKAITVVIAFKAT
                     FPGRIIRWLMISRAPNYTIPICTLIQLVLCGIWMATFPPFVDQDDHTEHGHVIIFCNK
                     GSSVAFHCALGYLCFLALGSYAMAFFSRNLPDTFNESKFLSFSMLVFFCVWITFLPVY
                     HSTKGKIMLAMEVFCILASSAALLGFIFTPKCYIILLRPEKNSFHRIRNKIHSKGNVS
                     QTIVQKPI"
     exon            1..224
                     /gene="Vom2r11"
                     /gene_synonym="RGD1563778"
                     /inference="alignment:Splign:2.1.0"
     exon            225..519
                     /gene="Vom2r11"
                     /gene_synonym="RGD1563778"
                     /inference="alignment:Splign:2.1.0"
     exon            520..1326
                     /gene="Vom2r11"
                     /gene_synonym="RGD1563778"
                     /inference="alignment:Splign:2.1.0"
     exon            1327..1527
                     /gene="Vom2r11"
                     /gene_synonym="RGD1563778"
                     /inference="alignment:Splign:2.1.0"
     exon            1528..1651
                     /gene="Vom2r11"
                     /gene_synonym="RGD1563778"
                     /inference="alignment:Splign:2.1.0"
     exon            1652..2595
                     /gene="Vom2r11"
                     /gene_synonym="RGD1563778"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaagatgt tctcctggat ttttatcacc agctttttgc agactcctta tcttgttttc
       61 acctttaacc tgagtatctg ctattactta atcactgaag attttcatca tgaaggagat
      121 ttgatgattg gtgcattttt tccagttcat acttactaca ccgtgaacaa aattccaaat
      181 gtacaatttc ctaatatata ctattatcaa gactattacc tacagtttaa ttttaagaac
      241 taccagtatg ttttggctct ggaatttgcc attgaggaga tcaataggaa tcccaatctt
      301 ttacccaacc taactcttgg atttgatttc tacaatgtca aattcacaga aaaggaaact
      361 ctaatgaatg tatgtatgtg gcttacagct cacaaaaggg gaaaggtttt acctaattac
      421 aactgcgaag agaaaaattt tactgctgca ttcacaggaa catcatggac aacgtctgca
      481 cacattggga cattgctaca actcttcaga ttcccacagc tttctattgg accttatgat
      541 actgccttga atgatcatgg ccagtattct tcgctctacc agatggccac taaagacaca
      601 tctctctcac atggcattgt ctccttgatg ctttatttta ggtggtcctg ggttggtctc
      661 ctcctcccag atgaccataa agggaataaa gttttatcag agtttaggga tgagatggag
      721 agagaaagag tctgcatagc ttttgtgaaa atgatcccaa ccacctggac tttatatttt
      781 aacaaacaat ggaaaaatat ggaagagatc gaggaatctt cgacaaatgt gataattatt
      841 tatggtgatg ttgattcttt acaaggtctc atgcgaaata ttgggcaaag gttactgaca
      901 gggaaagtat gggtaatgaa ttttgaacag gatattaccg accatgctga ttatttcctg
      961 ttagactcat tccatgggag tttcattttt acacaacatt acggggagag ttttgagttt
     1021 accaagttta ttcaaactgt taatccttac aaatatccag aagacattta tcttcctaaa
     1081 atgtggcatt atttcttcaa gtgctcatat tctgaagttg attgtaaact tttggacaac
     1141 tgtcaagcca atgcaacttt gaatgtatta ccgagacaca tatttgatgt gtccatgagt
     1201 aaggagagct ataatatata caatgctgtg tatgctgtgg ctcacagtct ccatgagatt
     1261 actcttaagc aagtacaaat gcaaccatgc aaaaacggag aagagctgtt gttttatccc
     1321 tggcagatta actctttcct gaggaaaaac atgggattag attggagaca gaaaagaaat
     1381 gaagagtatg atattcttaa tctttggaat tttccaaagg gtcttggact aaagattaaa
     1441 ataggaaagt attcagaaaa tgctcccgat gggcaacagt tgactttatc tgaccagatg
     1501 attcaatggc cagaaaagtt ttcagagatt cctcaatctg tgtgcagtga gagttgtggg
     1561 cctggattca ggaaagtcac cttggagggt caagcagtct gctgctacaa ttgcacacct
     1621 tgcgcagaaa atgagatttc caatgagaca gatgtagatc attgtgtgaa gtgtccagaa
     1681 agttattatg caaatacaga gaagaaccac tgcctccaga aagctcaaag ctttctggcc
     1741 tatgaggacc ccttgggaat ggctctcacc agcatatccc tgttattttc tgccctcaca
     1801 gtcattgttg ttgggatctt tgtaagacac agacacactc caatggtcaa ggctaataat
     1861 cgagctctca gttacacttt gctcatctca ctcaacttct gttttctctg ctctttgaac
     1921 ttcattggcc agcccaacac agccacctgc attctgcagc agacaatatt tggagttgca
     1981 ttcactgtgg ctcttgccac tgtgttagcc aaagcaatca ctgtggtcat tgctttcaag
     2041 gccacttttc cagggagaat aataaggtgg ctaatgatat caagggcccc aaactatacc
     2101 attcctatct gcaccctgat tcaacttgtt ctttgtggaa tatggatggc aacatttcct
     2161 ccatttgttg accaagatga tcatactgaa catgggcatg tcatcatttt ttgcaacaag
     2221 ggctcatctg tagcttttca ctgtgctctg ggatacctct gtttcttggc acttgggagt
     2281 tatgccatgg cctttttctc aaggaatctg ccagatacat tcaatgaatc caaatttctg
     2341 tcattcagca tgctggtgtt cttctgtgtc tggatcacct tcctccctgt ctaccacagc
     2401 actaagggga aaattatgtt ggctatggaa gtcttctgta ttttggcttc cagtgcagca
     2461 ctccttggct tcatatttac ccctaagtgt tacattatat tgttgagacc agaaaaaaac
     2521 tcctttcatc gtattaggaa caaaatacat tctaaaggaa atgtttcaca aaccatagtt
     2581 caaaaaccaa tttag
//
