LOCUS       NM_001099461            2517 bp    mRNA    linear   ROD 15-MAY-2024
DEFINITION  Rattus norvegicus vomeronasal 2 receptor, 1 (Vom2r1), transcript
            variant 2, mRNA.
ACCESSION   NM_001099461 XM_001053213
VERSION     NM_001099461.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2517)
  AUTHORS   Young,J.M. and Trask,B.J.
  TITLE     V2R gene families degenerated in primates, dog and cow, but
            expanded in opossum
  JOURNAL   Trends Genet 23 (5), 212-215 (2007)
   PUBMED   17382427
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Mar 15, 2021 this sequence version replaced NM_001099461.1.
            
            Sequence Note: This record was generated from sequence identified
            by Janet Young (Fred Hutchinson Cancer Research Center).
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-206               JAXUCZ010000001.1  164474-164679
            207-477             JAXUCZ010000001.1  167337-167607
            478-1281            JAXUCZ010000001.1  168042-168845
            1282-1506           JAXUCZ010000001.1  169698-169922
            1507-1630           JAXUCZ010000001.1  171132-171255
            1631-2517           JAXUCZ010000001.1  174328-175214
FEATURES             Location/Qualifiers
     source          1..2517
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1p13"
     gene            1..2517
                     /gene="Vom2r1"
                     /note="vomeronasal 2 receptor, 1"
                     /db_xref="GeneID:678740"
                     /db_xref="RGD:1596944"
     CDS             1..2517
                     /gene="Vom2r1"
                     /note="isoform 2 precursor is encoded by transcript
                     variant 2; vomeronasal type-2 receptor 26-like"
                     /codon_start=1
                     /product="vomeronasal 2 receptor 1 precursor isoform 2
                     precursor"
                     /protein_id="NP_001092931.2"
                     /db_xref="GeneID:678740"
                     /db_xref="RGD:1596944"
                     /translation="MKKLCAFTIAFFPLKFCLILCSLTEPNCFWRIKKIEVYDGDLQN
                     DCGFVLFTLESPIEENFYNHIINFRKYEFFLVMFFATDEINKNPYLLSNMSLIFSFIF
                     GMCEDTMGVLDKAYLHQNNYFDLLNYNCGRKKRCDVKLTGPSWKTSLKLSVNSRAPKI
                     FFGPFNPNLSDHDQFPYIYQIATKDTYLLHGMVSLMFHFEWTWIGLIITDDDQGIQFH
                     SDLREEMQRHAICLAFVIMIPESIKLYNTKFKIYDQQLMTSSAKVTIIYGKMISTLEL
                     NFARWTYLVARRIWITTSKLDVITYDKDFSLDFFHGTVIFAHHHNDIATFRNFMQIIN
                     TSKYPVDISQSMGQWNHFNCSISKNKKKMDFFMLKNPMEWLTQHTFDMVLSEEGYNLY
                     NAVYAVAHTYHELIFQQVESQEMAKPKGLFTDCQQVASLLKTRVFTNPVGELVNMNHK
                     ENQCAKYDIFIIWNFPNGLGLKVKIGSYFPCLQQSQHLHISEDWEWVTGETLVPSSVC
                     SETCTAGFRKSHQKQTANCCFDCVQCQENEIANDTADMEQCVRCPDDSYANLEQTQCL
                     QRAVTFLAYEDPLGMALGCMALSFSAITVLVLVTFVKYRDTPIVKANNRILSYILLIS
                     LVFCFLCSLLFIGHPNQATCILQQATFAIFFTVAISTVLAKTITVVTAFKLTTPGRRI
                     RKMMIKVATHLLIPICTLIQLVLCAIWLVTSPPFIDRDIQSEHGKVIIICNKGSVIAF
                     HFVLGYLGSLALGSFTVAFLARNLPDRFNEAKFLTFSMLVFYSVWITFLPVYHSTRGK
                     VMVIVEVFSILASSAGLLGCIFVQKCYVLLVRPDLNVLQK"
     exon            1..206
                     /gene="Vom2r1"
                     /inference="alignment:Splign:2.1.0"
     exon            207..477
                     /gene="Vom2r1"
                     /inference="alignment:Splign:2.1.0"
     exon            478..1281
                     /gene="Vom2r1"
                     /inference="alignment:Splign:2.1.0"
     exon            1282..1506
                     /gene="Vom2r1"
                     /inference="alignment:Splign:2.1.0"
     exon            1507..1630
                     /gene="Vom2r1"
                     /inference="alignment:Splign:2.1.0"
     exon            1631..2517
                     /gene="Vom2r1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaagaagc tgtgtgcttt cactattgcc ttttttcctc tgaagttttg tctcatcttg
       61 tgcagtttga ctgaacccaa ttgcttttgg aggataaaaa agatcgaagt ttatgatgga
      121 gatttgcaaa atgactgtgg ttttgtcctt tttacacttg agagccctat tgaagaaaat
      181 ttttataatc acattattaa ttttagaaaa tatgaatttt ttctggtaat gttttttgct
      241 actgatgaga tcaacaagaa tccttatctt ttatccaaca tgtctttgat attttccttc
      301 atttttggta tgtgtgaaga tacaatggga gttctggata aagcatattt acatcaaaac
      361 aactatttcg atctacttaa ttataactgt ggaagaaaga aacgttgtga tgtaaaactt
      421 acaggaccat catggaaaac ttccttaaaa ctttcagtta attcaagggc accaaagatt
      481 ttctttggac catttaatcc taacctgagt gaccatgacc agtttcccta tatctatcag
      541 atagcaacca aggacacata tttgctccat ggcatggtct ccttgatgtt tcattttgaa
      601 tggacttgga taggactgat catcacagat gatgaccaag gtattcagtt tcactcagac
      661 ttgagagaag aaatgcaaag gcatgcgatc tgtttagctt ttgtgattat gatcccagaa
      721 agcattaagt tatacaacac aaagtttaag atatatgacc aacaacttat gacatcttct
      781 gcaaaggtta ctatcattta tggcaaaatg atctccactc tagaactcaa ctttgcaaga
      841 tggacatatt tagttgcacg gagaatctgg atcacaacct caaaattgga tgtcatcaca
      901 tatgataaag atttcagcct tgatttcttc cacgggactg tcatttttgc ccaccaccac
      961 aatgacatcg ctacatttag aaattttatg caaataataa acacatccaa gtatccagta
     1021 gatatttctc agtctatggg gcagtggaat cattttaact gttcaatctc aaagaacaag
     1081 aagaaaatgg atttttttat gttgaaaaac ccaatggaat ggttaacaca gcacacattt
     1141 gacatggtcc tgagtgaaga aggttacaat ttgtataatg ctgtgtatgc tgtggcccac
     1201 acctatcacg aactcatttt tcaacaagta gagtctcagg aaatggccaa acccaaagga
     1261 ctattcactg actgtcagca ggtggcttct ttgcttaaaa ctagggtatt tactaaccct
     1321 gttggagagc tggtgaacat gaatcataag gaaaatcagt gtgccaagta tgacattttc
     1381 atcatttgga attttccaaa tggccttgga ttaaaagtga aaataggaag ctattttcct
     1441 tgtttgcaac agagtcaaca tcttcatata tctgaagact gggagtgggt tacaggagaa
     1501 acattggttc cctcctcagt gtgtagtgag acatgtactg caggattcag aaaaagtcat
     1561 cagaaacaaa cagccaactg ctgctttgat tgtgtccagt gccaagaaaa tgagattgcc
     1621 aatgatacag cagatatgga gcagtgtgtg cggtgtccag atgattcata tgccaactta
     1681 gaacaaaccc agtgcctcca aagagcggtg acgtttctcg cttatgaaga tccattgggg
     1741 atggctctag gctgcatggc cctgtccttt tcagccatca cagttctagt actagtcact
     1801 tttgtgaagt acagggatac acccattgtg aaagccaata accgtattct cagctacatc
     1861 ctgctcatat ctctagtctt ctgttttctc tgctcattgc tcttcattgg acatcccaac
     1921 caggccacct gcatcctgca gcaggccacg tttgcaatat ttttcactgt ggctatttct
     1981 actgtgttgg ccaaaacaat aactgtggtc acagctttca agctcactac tccagggaga
     2041 aggataagaa agatgatgat aaaagtggca actcacttgc tcattcccat ttgtacccta
     2101 atccaacttg ttctctgtgc aatctggttg gtgacatctc ctccatttat tgacagagat
     2161 atacaatctg aacatgggaa ggtaatcatc atttgcaaca aaggctcagt cattgccttc
     2221 cactttgtct tgggatattt gggctccttg gctctgggga gcttcactgt ggctttcttg
     2281 gctaggaacc ttcctgacag attcaatgag gccaagttcc taacattcag catgttggtg
     2341 ttctacagtg tttggatcac cttcctccct gtctaccaca gcaccagggg gaaggttatg
     2401 gttattgtgg aggttttctc catcttggct tctagtgcag ggttgctagg gtgcatattt
     2461 gtccaaaagt gttatgttct tttagttcga ccagatttaa atgttcttca gaaataa
//
