LOCUS       NM_001166760             825 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 1 receptor 99 (Vom1r99), mRNA.
ACCESSION   NM_001166760 XM_002726412 XM_002729399
VERSION     NM_001166760.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 825)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 825)
  AUTHORS   Young,J.M., Massa,H.F., Hsu,L. and Trask,B.J.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
COMMENT     PROVISIONAL REFSEQ: This record is based on preliminary annotation
            provided by NCBI staff in collaboration with Janet Young. The
            reference sequence was derived from JAXUCZ010000004.1.
            
            On or before May 13, 2010 this sequence version replaced
            XM_002726412.1, XM_002729399.1.
            
            Sequence Note: A set of diverse V1R queries was aligned via BLAST
            to the RGSCv3.4 assembly to find candidate V1R-containing genomic
            regions. Open reading frames (ORFs) for V1R genes and pseudogenes
            were then identified.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-825               JAXUCZ010000004.1  123988112-123988936 c
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q34"
     gene            1..825
                     /gene="Vom1r99"
                     /gene_synonym="Vom1r-ps113"
                     /note="vomeronasal 1 receptor 99"
                     /db_xref="GeneID:685880"
                     /db_xref="RGD:1589006"
     CDS             1..825
                     /gene="Vom1r99"
                     /gene_synonym="Vom1r-ps113"
                     /note="vomeronasal 1 receptor Vom1r99; vomeronasal 1
                     receptor pseudogene 113"
                     /codon_start=1
                     /product="vomeronasal 1 receptor 99"
                     /protein_id="NP_001160232.1"
                     /db_xref="GeneID:685880"
                     /db_xref="RGD:1589006"
                     /translation="MSEILFVFPQPLFSYVMSTNSRLHTDSHIRDTFFTEIGIGISVN
                     NLPLLFHIFTLIRGQRSRLTDLPIDLLSLLNLLMLLMWLLATDIFISWRGWDDIICKF
                     LVYLYRSFRGLSLCTTCLLSVLQAIILSPRSSCLAKFKHMPTHQVSNAMLFLSVLYMF
                     ISSHLLLSITATPSLTTNDFIHVTQSCSILPLSYLMPSMFSILLAIRVVFLISLMVLS
                     TWYMLALLFRHRKQSRHLQGTSLSPKASPGQRVTHSILMHKRGTQIKSSGYLQLSI"
     exon            1..825
                     /gene="Vom1r99"
                     /gene_synonym="Vom1r-ps113"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgagtgaga ttctgttcgt ttttcctcag ccactgttct catatgtgat gagtacgaac
       61 agcagactcc acactgattc tcacataagg gatacctttt tcactgaaat tggcattgga
      121 atctcagtca acaacctccc acttctcttc cacatcttca cgttaattcg tgggcagagg
      181 tccagactca ctgacctgcc cattgatctc ttgtccctac tcaacttact tatgctactg
      241 atgtggctat tagccacaga catttttatt tcttggaggg gatgggatga catcatatgt
      301 aaattccttg tctacctgta cagaagtttt agaggtctct ctctttgtac cacctgcctg
      361 ttgagtgtcc tgcaggccat catcctcagt cccagaagct cctgtttagc aaagttcaaa
      421 catatgccta ctcatcaggt ctccaatgcc atgcttttcc tgagtgtcct ctacatgttt
      481 attagcagtc atctcttatt atccatcact gccaccccca gtttgaccac gaatgacttt
      541 attcatgtta ctcagtcctg ctctattcta cccttgagtt acctcatgcc aagcatgttt
      601 tctatactgc tggccatcag ggttgtcttt cttattagtc tcatggttct ctcaacatgg
      661 tacatgctgg ctctcttgtt taggcacagg aaacagtccc ggcatcttca gggtaccagc
      721 ctttccccaa aagcatcccc agggcaaagg gtcacccatt ccatcctgat gcataaaaga
      781 ggcacccaaa taaaatcatc tggttacctt caattgtcaa tttga
//
