LOCUS       XM_039109073             984 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal 1 receptor 96 (Vom1r96),
            mRNA.
ACCESSION   XM_039109073
VERSION     XM_039109073.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086022) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..984
                     /gene="Vom1r96"
                     /note="vomeronasal 1 receptor 96; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 52
                     Proteins"
                     /db_xref="GeneID:494275"
                     /db_xref="RGD:1549781"
     CDS             25..984
                     /gene="Vom1r96"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 96"
                     /protein_id="XP_038965001.1"
                     /db_xref="GeneID:494275"
                     /db_xref="RGD:1549781"
                     /translation="MNKVNILPSDTNIKITLFSEVSVGISANSVLFFAHLCMFFEENR
                     SKPIDLCIAFLSLTQLMLLVTMGLIAADMFMSQGIWDSTTCRSIIYFHRLLRGFNLCA
                     ACLLHILWTFTLSPRSSCLTKFKHKSPHHISCAFFSLCVLYMLFSSHLFVLIIATSNL
                     TSDHFMYVTQSCSILPMSYSRTTMFSLVMVTREAFLISLMALFSGYMVTLLWRHKKQV
                     QHLHSTSLSSKSSPQQRATRTILLLMSFFVVLYILDIVIFQSRTKFKDGSMFYSLHII
                     VSHSYATISPFVFIFSDKRIIKFLGSMSGRIINICLFSDGYGP"
ORIGIN      
        1 gtatttgctt caaaccgaca tacaatgaat aaagtcaaca tactcccctc tgacactaac
       61 ataaaaatca ccctgttctc tgaagtgagt gttgggatct cagctaacag tgtcctgttt
      121 tttgcccacc tctgcatgtt ctttgaagag aacaggtcta agcccattga tctgtgcatt
      181 gctttcttat ccttaaccca actaatgctg cttgtaacta tgggactcat agctgcggac
      241 atgtttatgt ctcaggggat atgggattct accacatgca ggtccattat ctattttcac
      301 agacttttga ggggtttcaa cctttgtgct gcctgtctac tgcatatcct ttggaccttc
      361 actctcagtc ctagaagctc ctgtttaaca aaatttaaac ataaatctcc ccatcacatc
      421 tcatgtgcct ttttttccct ctgtgttctc tatatgctct ttagcagtca cctctttgta
      481 ttgatcattg ctacctccaa tttaacctca gatcatttta tgtatgttac tcagtcctgc
      541 tcaattctac ccatgagtta ctccagaaca accatgtttt ccttagtgat ggtcacaagg
      601 gaagcctttc ttatcagtct catggctctg ttcagtgggt acatggtgac tctcctatgg
      661 agacacaaga agcaggtcca gcatcttcac agcaccagcc tttcttcaaa atcatcccca
      721 cagcaaaggg ccaccaggac catcctgttg cttatgagct tctttgtggt tctttacatt
      781 ttagatattg ttatcttcca atcaaggaca aagttcaagg atgggtcaat gttctactct
      841 ttgcacatta ttgtgtccca tagctatgcc accatcagcc cttttgtgtt tattttctct
      901 gacaagcgca taatcaagtt tttggggtca atgagtggca gaataataaa tatttgttta
      961 ttcagtgatg ggtatggacc ctga
//
