LOCUS       NM_153729               1500 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 1 receptor 90 (Vom1r90), mRNA.
ACCESSION   NM_153729
VERSION     NM_153729.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1500)
  AUTHORS   Young,J.M., Massa,H.F., Hsu,L. and Trask,B.J.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
REFERENCE   2  (bases 1 to 1500)
  AUTHORS   Dulac,C. and Axel,R.
  TITLE     A novel family of genes encoding putative pheromone receptors in
            mammals
  JOURNAL   Cell 83 (2), 195-206 (1995)
   PUBMED   7585937
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Mar 29, 2021 this sequence version replaced NM_153729.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: U36898.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760434,
                                           SAMN16418988 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-33                JAXUCZ010000004.1  123705244-123705276 c
            34-199              JAXUCZ010000004.1  123700167-123700332 c
            200-1500            JAXUCZ010000004.1  123696273-123697573 c
FEATURES             Location/Qualifiers
     source          1..1500
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q34"
     gene            1..1500
                     /gene="Vom1r90"
                     /gene_synonym="V1ra16"
                     /note="vomeronasal 1 receptor 90"
                     /db_xref="GeneID:266771"
                     /db_xref="RGD:708509"
     exon            1..33
                     /gene="Vom1r90"
                     /gene_synonym="V1ra16"
                     /inference="alignment:Splign:2.1.0"
     exon            34..199
                     /gene="Vom1r90"
                     /gene_synonym="V1ra16"
                     /inference="alignment:Splign:2.1.0"
     exon            200..1500
                     /gene="Vom1r90"
                     /gene_synonym="V1ra16"
                     /inference="alignment:Splign:2.1.0"
     CDS             229..1161
                     /gene="Vom1r90"
                     /gene_synonym="V1ra16"
                     /note="vomeronasal type-1 receptor A16; vomeronasal
                     V1r-type receptor V1ra16; pheromone receptor VN6;
                     vomeronasal receptor 6; vomeronasal 1 receptor, A16;
                     putative pheromone receptor VN6; vomernasal 1 receptor
                     Vom1r90"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 90"
                     /protein_id="NP_714951.2"
                     /db_xref="GeneID:266771"
                     /db_xref="RGD:708509"
                     /translation="MRRISTLYGVVDKQAIFFSEVVIGISFNSILFLFHIFQFLLERR
                     LRITDLIISLLALIHLGMLTVMGFRAVDIFASQNVWNDIKCKSLAHLHRLLRGLSLCA
                     TCLLSIFQAITLSPRSSCLAKFKYKSTQHSLCSLLVLWAFYMSCGTHYSFTIVADYNF
                     SSRSLIFVTESCIILPMDYITRHLFFILGIFRDVSFIGLMALSSGYMVALLCRHRKQA
                     QHLHRTSLSPKASPEQRATRTILLLMSFFVLMYCLDCTISASRLMHNGEPIHHSIQMM
                     VSNSYATLSPLLLIVTENRISRFLKSLLGRTVDA"
ORIGIN      
        1 gactcagagt ccttccctgc tatgtgtatc tggagccagc gactcttcta tggagagcag
       61 ctgtgcaggc aggtggtgga gcggaagaag gcgtgctgct gtgacatcat caagatgctg
      121 cctagccctg cgtcgctgct cttctgagga agcaggagac tgacccctgt gacaatgact
      181 tgatgagtca ctctgttgtc tacttaccct agttctttgt cccatacaat gaggagaatc
      241 agcacactgt atggagttgt tgacaagcaa gctatatttt tctctgaagt agtcatcggg
      301 atctcattca acagtatcct cttcctcttc cacatctttc agttccttct tgagcgtagg
      361 ctccggatca ctgacctgat catcagtctc ttggccctca tccaccttgg gatgctaaca
      421 gtcatgggat tcagagctgt tgatattttt gcatctcaga atgtgtggaa tgacatcaaa
      481 tgcaaatccc ttgcccactt acacagactt ttgaggggcc tctctctttg tgctacctgt
      541 ctgctgagta tcttccaggc catcaccctt agccccagaa gctcctgttt agcaaagttc
      601 aaatataaat ccacacagca cagcctgtgt tcccttcttg tgctctgggc cttctacatg
      661 tcctgtggta ctcactactc cttcaccatc gttgctgact acaacttctc ttcacgcagt
      721 ctcatatttg tcactgaatc ctgcattatt ttacccatgg attacatcac caggcattta
      781 tttttcatat tggggatatt tcgggatgtg tccttcatag gtctcatggc cctctccagc
      841 gggtacatgg tggccctctt gtgcagacac aggaaacagg cccagcatct tcacaggacc
      901 agcctttctc caaaagcatc cccagagcaa agggccacca ggaccatcct gttgctcatg
      961 agcttctttg tgttgatgta ctgcttggac tgcaccatat ccgcctccag acttatgcac
     1021 aacggtgaac caatccacca cagtattcag atgatggtct ccaatagcta tgccaccctc
     1081 agccctttgc tgttaattgt tactgaaaat cgaattagta ggtttttgaa gtccttgcta
     1141 ggaaggacag tagatgctta agtattgagg ggaggcaggc ccactaaagg agccaatatg
     1201 ctagctactg aataatgaat cctggcctag tcctcatgca atcctgaaca aattaataca
     1261 tgactcatgc ttcgttaaac ctgcttcttt tgaaatgtgt attaccaaca cctgtagata
     1321 tttgagtcaa atttcttcat gtgtatttct tctcagtgtc agtaggggac atctgtgaca
     1381 ctttcacaga ttagggtaac ttgtgcactt atcaataagc taaagtgtac agcacatttt
     1441 actaagccaa ttatctcaac agtttgtttt ctacccaatt aaatatgtaa atgttaccac
//
