LOCUS       NM_001167547             951 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 1 receptor 9 (Vom1r9), mRNA.
ACCESSION   NM_001167547
VERSION     NM_001167547.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 951)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 951)
  AUTHORS   Young,J.M., Massa,H.F., Hsu,L. and Trask,B.J.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. This record has been curated by NCBI staff in
            collaboration with Janet Young. The reference sequence was derived
            from JAXUCZ010000001.1.
            
            Sequence Note: A set of diverse V1R queries was aligned via BLAST
            to the RGSCv3.4 assembly to find candidate V1R-containing genomic
            regions. Open reading frames (ORFs) for V1R genes and pseudogenes
            were then identified.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-951               JAXUCZ010000001.1  68705935-68706885
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..951
                     /gene="Vom1r9"
                     /note="vomeronasal 1 receptor 9"
                     /db_xref="GeneID:100312665"
                     /db_xref="RGD:2316475"
     exon            1..951
                     /gene="Vom1r9"
                     /inference="alignment:Splign:2.1.0"
     CDS             52..951
                     /gene="Vom1r9"
                     /note="vomeronasal 1 receptor Vom1r9; vomeronasal type-1
                     receptor 2-like; vomeronasal 1 receptor, E8-like"
                     /codon_start=1
                     /product="vomeronasal 1 receptor 9"
                     /protein_id="NP_001161019.2"
                     /db_xref="GeneID:100312665"
                     /db_xref="RGD:2316475"
                     /translation="MDARNLGVGITYLLQSVVGLLGNISLIFYYLIIYYKKHKIKPMD
                     LILMHLIIVNILIILSKGLATTMGCFGLKLFFNDWSYHFFMYVLRVFRSMSIVTICLL
                     SVFQAITIMPRNSCLKNLRVKSTMDISFCISLCWVLYIIINVIFPLYMSITLSRKNIT
                     KDTNFKLYTIVGYDKITGSLYTTFFVFPEILFSGLITWSSSSMIVLLYRHKRRVQYLQ
                     STHASHSSSPESRATQNILVLVSIFLAFYTISAISHAYSALFHSSDKWLMIFSNILTL
                     CLPTSSLFVLMSHSSSLSKLCFL"
ORIGIN      
        1 ctgagaaatg tttggcagca tattttgaag tcagtttttc tcagtaacag tatggatgcc
       61 aggaatttgg gagtaggaat aacatatctg ttacagagtg tagttggact tctaggaaac
      121 atctctctca ttttctacta cttgattatt tactataaga aacacaaaat aaagcccatg
      181 gatttgattc tcatgcatct gatcatagtt aacatcttga tcattctctc taaaggattg
      241 gctaccacaa tgggatgttt tggcttgaaa cttttcttta atgattggag ctatcatttt
      301 tttatgtatg ttctaagagt tttcaggagc atgtccattg tcaccatctg cctcttgagt
      361 gtcttccagg ctatcaccat catgccaaga aactcctgtt tgaaaaatct tagagtcaag
      421 tctacaatgg acattagttt ctgcatttct ctctgctggg tcttgtacat cattataaat
      481 gttattttcc ctttgtacat gtccataaca ttaagtagga aaaatataac aaaggataca
      541 aatttcaagc tctatactat tgtaggatat gacaaaatca caggttcatt atatacaact
      601 ttttttgtgt ttcctgaaat tctgttttct ggtctcatca cttggtccag tagctcaatg
      661 attgtccttc tgtacaggca caaacgacga gttcaatacc tccaaagtac tcatgcttcc
      721 catagcagct cccctgaatc cagagccact cagaacattc tggtactagt ttccatcttt
      781 cttgcttttt atacaatctc tgccatctca catgcttaca gtgctctttt tcacagttca
      841 gataagtggc tgatgatttt ctcaaacatt ttaactttgt gtcttcccac ttcaagcctt
      901 tttgtactta tgagtcactc atcctctctc tccaaactct gctttctcta g
//
