LOCUS       XM_039108524             925 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal 1 receptor 89 (Vom1r89),
            mRNA.
ACCESSION   XM_039108524
VERSION     XM_039108524.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108524.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..925
                     /gene="Vom1r89"
                     /note="vomeronasal 1 receptor 89; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 37
                     Proteins, and 94% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:494276"
                     /db_xref="RGD:1359215"
     CDS             8..925
                     /gene="Vom1r89"
                     /codon_start=1
                     /product="putative vomeronasal receptor-like protein 4"
                     /protein_id="XP_038964452.1"
                     /db_xref="GeneID:494276"
                     /db_xref="RGD:1359215"
                     /translation="MFSLINVLYFQAGLGALANIFLLLFYTIIILCHRSKPMDLISYQ
                     LTFVHIMMILTAGEIWLTDLFESLNIENDLKCKATFYINRVMRGLSICITCLLSVFQT
                     VTISPSTSLLAKFKQKLKKYIIYALFYLWSFNLSFSSNRIFYVGAYTNVSETSQMRVT
                     KYCSLFPMNIIIRGLILTMTTSRDVFLVGVMLTTSMYMVIILCRHQRQCKHLHSISHL
                     RASPEKRATQTILLLVGFFVVMYWVDFIISSTSVLLWMYDPVILTVQKFVMNAYPTIT
                     PLIQISSDNRIIITLKNMQKICHQIFKKG"
ORIGIN      
        1 tccaattatg ttttcattaa ttaatgtcct ttatttccaa gctgggcttg gagccctagc
       61 caatatattt cttcttcttt tctacactat cataatccta tgtcacagat ctaagcccat
      121 ggacttgatc tcctatcaac tgaccttcgt tcacataatg atgatcctca ctgcagggga
      181 gatttggctt acagacttat ttgagtcatt gaacattgag aatgacctca aatgtaaggc
      241 aactttttac ataaacaggg tgatgagagg cctctctatc tgtatcacct gcctcctgag
      301 tgtgttccag actgtcacta tcagtcccag tacctcactg ttggcaaaat ttaaacaaaa
      361 actgaaaaaa tacatcatct atgctttatt ctacttatgg tctttcaatt tgtccttcag
      421 cagtaaccgg atcttctacg ttggtgctta taccaacgtg agtgagacca gccagatgag
      481 ggtcactaaa tactgctcac tctttcccat gaacatcatc atcaggggac tgattttaac
      541 aatgacaact tccagagatg tatttctagt aggagtcatg ctgacaacaa gcatgtacat
      601 ggtgattatc ttgtgcagac atcagaggca gtgcaagcat cttcatagca tcagtcactt
      661 gagagcatcc cctgagaaaa gggccaccca gaccatcttg ctgttggtgg gtttttttgt
      721 ggtcatgtac tgggtggact tcatcatctc atccacctca gtcctattat ggatgtatga
      781 cccagtcatc ctgactgttc agaagtttgt gatgaatgcc tatcccacaa ttactccttt
      841 gatacaaatc agttctgata accgaataat cattacgctg aaaaacatgc agaaaatatg
      901 ccaccagatt tttaaaaagg ggtag
//
