LOCUS       NM_001009513             894 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 1 receptor 88 (Vom1r88), mRNA.
ACCESSION   NM_001009513 XM_039108685
VERSION     NM_001009513.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 894)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 894)
  AUTHORS   Young,J.M., Massa,H.F., Hsu,L. and Trask,B.J.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Jun 29, 2022 this sequence version replaced XM_039108685.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR26360190.1989207.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-894               JAXUCZ010000004.1  88677094-88677987
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q24"
     gene            1..894
                     /gene="Vom1r88"
                     /gene_synonym="V1rc28"
                     /note="vomeronasal 1 receptor 88"
                     /db_xref="GeneID:494233"
                     /db_xref="RGD:1549699"
     CDS             1..894
                     /gene="Vom1r88"
                     /gene_synonym="V1rc28"
                     /note="vomeronasal 1 receptor, C28; vomernasal 1 receptor
                     Vom1r88; vomeronasal V1r-type receptor V1rc28; vomeronasal
                     type-1 receptor 90"
                     /codon_start=1
                     /product="vomeronasal 1 receptor 88"
                     /protein_id="NP_001009513.1"
                     /db_xref="GeneID:494233"
                     /db_xref="RGD:1549699"
                     /translation="MSSSHTVLYFQAGLGVIANMFLPLFYIFIILSHRPKPMDLISCQ
                     LTFIHIMMILTAGDILLADILQSLKFGNDFKCKTTIYINRVMRGLSICVTCLLSVFQA
                     VTISPNNSLLAKFKHKVQKCIIYAFFYIWSFNLLFSSRWFFYAAGFTNESVTNQMKVS
                     KSCFLFPMNHILRGLMVTMAMSRDVFLVGVMLTTSAYMVIILFRHQRQCKHLHSIRHL
                     RASPEKRATQTILLLVVFFVVMYWVDFVISFTSILLGVYDPVVLTVQISMMNVYPTIT
                     PLIQISSDKRIINVLKYLRSK"
     exon            1..894
                     /gene="Vom1r88"
                     /gene_synonym="V1rc28"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtcctcat cacatactgt cctttatttc caagctggac ttggagtcat agccaatatg
       61 tttctccctt tgttctatat tttcataatc ctaagtcaca gacctaagcc catggacctg
      121 atctcctgtc aactgacctt cattcacata atgatgatcc tcactgcagg agacattttg
      181 cttgcagaca tattacagtc actaaaattt gggaatgact tcaaatgtaa gacaactatt
      241 tacataaaca gagtgatgag aggcctctct atctgtgtca cctgcctgct gagtgtgttc
      301 caggctgtca ctatcagtcc gaataactct ttgttggcaa aatttaagca taaagtacaa
      361 aaatgcatca tctatgcttt tttctatatt tggtccttca atttgttatt tagtagtagg
      421 tggttcttct atgctgctgg ttttaccaat gagagtgtga ccaaccagat gaaggtctct
      481 aaatcctgct ttctcttccc catgaaccac atcctcaggg gattgatggt aacaatggca
      541 atgtccagag atgtgtttct cgtaggagtc atgctgacca caagtgcgta catggtgatt
      601 atcttgttca gacatcagag gcaatgcaag catcttcata gcatcagaca cctgagagca
      661 tcccctgaga aaagggccac ccagaccatc ttgctgctgg tggttttctt tgtggttatg
      721 tattgggtgg acttcgtcat ctcattcacc tcaatcctgt taggggtcta tgacccagtc
      781 gtcctgactg ttcagatatc tatgatgaat gtttatccta caattactcc tttgatacaa
      841 ataagttctg ataagagaat aattaatgtg ctgaaatatt taaggtcaaa atga
//
