LOCUS       NM_001009518             900 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 1 receptor 80 (Vom1r80), mRNA.
ACCESSION   NM_001009518 XM_039108518
VERSION     NM_001009518.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 900)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 900)
  AUTHORS   Young,J.M., Massa,H.F., Hsu,L. and Trask,B.J.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On or before Jun 29, 2022 this sequence version replaced
            XM_039108518.1, NM_001009518.1.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-900               JAXUCZ010000004.1  88285097-88285996
FEATURES             Location/Qualifiers
     source          1..900
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q24"
     gene            1..900
                     /gene="Vom1r80"
                     /gene_synonym="V1rc38"
                     /note="vomeronasal 1 receptor 80"
                     /db_xref="GeneID:494238"
                     /db_xref="RGD:1549747"
     CDS             1..900
                     /gene="Vom1r80"
                     /gene_synonym="V1rc38"
                     /note="vomernasal 1 receptor Vom1r80; vomeronasal V1r-type
                     receptor V1rc38; vomeronasal 1 receptor, C38; vomeronasal
                     type-1 receptor 90"
                     /codon_start=1
                     /product="vomeronasal 1 receptor 80"
                     /protein_id="NP_001009518.2"
                     /db_xref="GeneID:494238"
                     /db_xref="RGD:1549747"
                     /translation="MSSLDNFLYIQAGLGVLANMFLLFFYTSIILRDRPKPMDLISCQ
                     LTFIHIMMILTEGDNLLPNILESLKFENDFKCKTTFYINRVMRGLSVCITCLLGVFQA
                     VTISPSTSLLAKFKGKVKTNIIYAFLYLWSFNLSFSSRWIFYVAGFSNVSENHQMRVT
                     KSCSLFPMNYIIRGLTLIVTMSRDVFLIGVMLTTSVYVVIILYRHQRQCKHLHSISHL
                     RASPEKRATQTVLLLVIFFVVIYWVDFIISFTSILLWMYDPVVLRVQKFVMCAYPTIT
                     PLVQINSDKRVISVLKNLHSKCH"
     exon            1..900
                     /gene="Vom1r80"
                     /gene_synonym="V1rc38"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtcctcat tagataactt cctttatatc caagctgggc ttggagtcct ggccaatatg
       61 tttctccttt ttttctatac ttccataata ctgcgtgaca gacctaagcc catggacctg
      121 atctcctgtc aactgacctt cattcacata atgatgatcc tcactgaagg agataatttg
      181 cttccaaaca tattagagtc actaaaattt gaaaatgatt tcaaatgtaa gacaacattt
      241 tacataaaca gagtgatgag aggcctctct gtctgcatca cctgcctcct gggtgtgttc
      301 caggctgtca caatcagtcc cagtacctcg ctgttggcaa aatttaaggg taaagtaaaa
      361 acaaacatca tctatgcttt cttatatctt tggtctttca atttgtcatt cagtagtagg
      421 tggatcttct atgtggctgg ttttagcaat gtaagtgaga accaccagat gagggtcact
      481 aaatcctgct cactcttccc catgaactac atcatcaggg gattaacttt aatagtaaca
      541 atgtccagag atgtatttct cataggagtc atgttgacca caagtgtata cgtagtgatt
      601 atcctgtata gacatcagag gcaatgtaag catcttcata gcattagcca cctgagagca
      661 tcccctgaga aaagggccac tcagactgtc ttgctgctgg tgattttctt tgtggtcatt
      721 tactgggtgg actttatcat ctcattcacc tcaatcctgt tatggatgta tgacccagtt
      781 gtcctgagag ttcagaagtt tgtgatgtgt gcctatccca caattactcc tttggtacaa
      841 atcaattctg ataaaagagt aatcagtgta ctgaaaaact tgcactccaa gtgccactag
//
