LOCUS       XM_039108517            1486 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal 1 receptor 79 (Vom1r79),
            mRNA.
ACCESSION   XM_039108517
VERSION     XM_039108517.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108517.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1486
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1486
                     /gene="Vom1r79"
                     /note="vomeronasal 1 receptor 79; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 66
                     Proteins, and 86% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:494227"
                     /db_xref="RGD:1359257"
     CDS             626..1486
                     /gene="Vom1r79"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 90"
                     /protein_id="XP_038964445.1"
                     /db_xref="GeneID:494227"
                     /db_xref="RGD:1359257"
                     /translation="MSLLCFYIFIILGHRPKPTDLISCQLTFIHIMMFLIGGDLLLTN
                     IFESLNIDNDFKCKATFYISRVMRGLSICTTCLLSVFQTVTISPSTSSLAKFKQKLKK
                     YMIHVFLCIWSFSLSYSSSRIFYVRGFTNVSETNQMQVTKSCTLLRMSSIIRVFIFTV
                     TTSRDVFLVGVMLSTSAYMVIILCRHQRQCMHLHSIRHLRASPEKRATQTILLLVVFF
                     VVMYWVDFIISTTSVLLWMYDPVVLSVQKFVVYAYPTISPFVQISSDNRIIIMLKLMH
                     SKHQQRFFKK"
ORIGIN      
        1 tattttgcta attaaaatag tggaattatc atgaactagc acagttcttt cattagaatt
       61 gtgaaggaaa acatagatat ttgcacaaaa tagagcacag taagacaatg gactcctgtc
      121 aggttttttt ttcctgatat tttttgtgac tatttcacat atcagcataa gttttattca
      181 gttataccaa tgtgattatc tgtgttcatc actactcttt taggtgttaa gtataaaata
      241 aatcaattta aataaacaga attggatttc ttaggcctga gacttagcag tacaaggttg
      301 caaattagaa attctgtata aatatgtgtg aatgcattta ttgttcataa tattgtatgt
      361 atataggcaa tacatgaaag gcatatagaa atgaaaaatc tggaacacag aaagttaaag
      421 agacaagcca atcatcaact agtatggaaa ataaaatgag gatataattt tattatccag
      481 tgtttcacaa gcttgatgta tactctattt ttttcagata tttgaaaaaa cttccactat
      541 gttcttaaga tgaatacaat tttcacttat ttcctcattc aagaatatcc tttatttcca
      601 ggctggtctt ggaatcctag caaatatgtc tcttctttgc ttctacattt ttataatcct
      661 aggtcacaga cctaagccca cagacttgat ctcctgtcaa ctgaccttca ttcacataat
      721 gatgttcctc attggagggg accttttgct tacaaatata tttgagtcat tgaacattga
      781 taatgacttc aaatgtaagg caacctttta cataagcagg gtgatgagag ggctctctat
      841 ctgtactacc tgcctcctga gtgtgttcca gactgtcact atcagtccta gtacctcttc
      901 tttggcaaag tttaaacaaa aactgaaaaa atatatgatc catgttttct tgtgtatttg
      961 gtcttttagt ttgtcctaca gtagtagccg gatcttctat gttcgtggtt ttactaatgt
     1021 gagtgagact aaccaaatgc aggttactaa atcctgcaca ctcctccgca tgagctccat
     1081 catcagagta tttattttta cagtgacaac ctctagagat gtgtttcttg taggagtcat
     1141 gctgtccaca agtgcataca tggtgattat cttgtgcaga catcagaggc aatgcatgca
     1201 tcttcatagc atcagacacc taagagcatc acctgagaaa agagccaccc agactatctt
     1261 gctgcttgtg gttttctttg tggtcatgta ctgggtggac ttcatcatct caactacatc
     1321 agtcctgctg tggatgtatg accctgtcgt cctcagtgtt cagaagtttg tggtgtatgc
     1381 ctatccaaca attagccctt ttgtacaaat cagttctgat aacagaataa tcattatgct
     1441 aaaactcatg cactcaaagc accagcagag gttttttaaa aaataa
//
