LOCUS       XM_039109062             918 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal 1 receptor 78 (Vom1r78),
            mRNA.
ACCESSION   XM_039109062
VERSION     XM_039109062.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086022) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..918
                     /gene="Vom1r78"
                     /note="vomeronasal 1 receptor 78; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 72
                     Proteins"
                     /db_xref="GeneID:494273"
                     /db_xref="RGD:1549704"
     CDS             1..918
                     /gene="Vom1r78"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 90"
                     /protein_id="XP_038964990.1"
                     /db_xref="GeneID:494273"
                     /db_xref="RGD:1549704"
                     /translation="MSSFKNILYFQAGIGVLANMSLLCFYIFIILGHRPKPTDLISCQ
                     LTFIHIMMFLTGGDIFLTDIFESLNVNNDFKCKATFYISRVMRVLSICTTYLLSVFQA
                     VTISPRTSLLAKFKQKLKKYMIHVFFCIWSFSLSYSGSRIYYVRGFTNASEIDQMQVT
                     KSCSIFRMNSIIRIFIFTVTTSRDVFLVGVMLSTSAYMVIILYRHQRQYKYLHSISHL
                     RTSPEKRATQTILLLVIFFVVMYWVDFIISSTSVLLWMYDPVFLSVQKFVVYAYPTIS
                     PLVQISSDNRITIMLKLMHSKHQQKFVKK"
ORIGIN      
        1 atgtcctcat tcaagaatat cctttatttc caggcaggaa ttggagtcct agcaaatatg
       61 tctcttcttt gtttctatat ttttataatc ctaggtcaca gacctaagcc cacagacttg
      121 atctcctgtc aactgacctt cattcacata atgatgttcc tcactggagg ggacattttc
      181 cttacagata tatttgagtc attgaacgtt aataatgact tcaaatgtaa ggcaaccttt
      241 tacataagca gggtgatgag agtcctctct atctgtacca cctacctcct gagtgtgttc
      301 caggctgtca ctatcagtcc cagaacttcg ttgttggcaa agtttaaaca aaaactaaaa
      361 aaatatatga tccatgtttt cttctgtatt tggtctttca gtttgtccta tagtggtagc
      421 cggatctatt atgttcgtgg ttttactaat gcaagtgaaa ttgaccagat gcaggttact
      481 aagtcctgct caatcttccg catgaactcc atcatcagaa tatttatttt tacagtgaca
      541 acctcaagag atgtgtttct tgtaggagtt atgctgtcca caagtgcata catggtgata
      601 attttgtaca gacatcagag gcaatacaag tatctccata gcatcagcca cctaagaaca
      661 tcccctgaga aaagagccac ccagaccatc ttgctgctgg taattttctt tgtggttatg
      721 tactgggtgg acttcatcat ttcttccaca tcagtcctgt tgtggatgta tgacccagtc
      781 ttcctgagtg ttcagaagtt tgtggtgtat gcctatccaa caattagtcc tttagtacaa
      841 atcagttctg ataacagaat aaccattatg ctgaaactca tgcactcaaa gcaccaacag
      901 aagtttgtta aaaaataa
//
