LOCUS       NM_001167552             948 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 1 receptor 60 (Vom1r60), mRNA.
ACCESSION   NM_001167552
VERSION     NM_001167552.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 948)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 948)
  AUTHORS   Young,J.M., Massa,H.F., Hsu,L. and Trask,B.J.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
COMMENT     PROVISIONAL REFSEQ: This record is based on preliminary annotation
            provided by NCBI staff in collaboration with Janet Young. The
            reference sequence was derived from JAXUCZ010000001.1.
            
            Sequence Note: A set of diverse V1R queries was aligned via BLAST
            to the RGSCv3.4 assembly to find candidate V1R-containing genomic
            regions. Open reading frames (ORFs) for V1R genes and pseudogenes
            were then identified.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-110               JAXUCZ010000001.1  83135921-83136030
            111-948             JAXUCZ010000001.1  83136031-83136868
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..948
                     /gene="Vom1r60"
                     /note="vomeronasal 1 receptor 60"
                     /db_xref="GeneID:100312671"
                     /db_xref="RGD:2316470"
     CDS             1..948
                     /gene="Vom1r60"
                     /note="vomeronasal 1 receptor Vom1r60; vomeronasal 1
                     receptor, J4-like"
                     /codon_start=1
                     /product="vomeronasal 1 receptor 60"
                     /protein_id="NP_001161024.1"
                     /db_xref="GeneID:100312671"
                     /db_xref="RGD:2316470"
                     /translation="MLPSDTIVQIFLILQFCLGVMGNSALLLLYIYTFVFRPQYKKLI
                     DSVFIHLTIVNILLIVFLLTKHIMLPFGVPNFLDDIGCKTVLFSFRVSRGLSICSTCV
                     ISTFQVITITPSTSKWAWLKPRLSTWIFSSLLCSWLINLLIYGYMLDMVIAKTNNTLV
                     GHGYTDGYCVNKQVGNHNSGSFLSIVIIHDLFFVTIMMCASLYMVLFLYRYRKGAQHL
                     RSPNLSFQPSPERKATHSILSLVSCFVLIYWLNNCVTLYSFYSSERIPRVESINAILT
                     TCYPTICPFLFMKNNKVILQFISSFSIQRMTCFQSSIHG"
     exon            1..948
                     /gene="Vom1r60"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgcttccaa gtgacactat tgtccagatc tttctcatat tgcagttctg tcttggtgtc
       61 atgggcaact cagcactatt gttgttatat atatacactt tcgtcttcag gcctcagtat
      121 aagaagttga tagattcagt tttcattcac ctgacaatag ttaatattct gctgattgta
      181 ttcctattga caaaacatat catgttaccc tttggagtac ccaattttct ggacgatatc
      241 ggttgtaaga cagttttgtt ttcattcaga gtcagccggg gtctgtccat ctgcagcacc
      301 tgtgttataa gcacattcca agtaatcacc atcactccca gtacttctaa gtgggcctgg
      361 cttaagccta gactctctac atggatcttt tcttccttac tttgctcctg gcttattaac
      421 ctactcatct atgggtatat gcttgacatg gtaattgcca aaactaataa tactcttgtt
      481 ggccatggat atacagatgg ttactgtgta aacaagcagg tggggaacca caattcaggg
      541 tcttttctta gcattgtcat cattcatgat ctcttctttg tgaccatcat gatgtgcgcc
      601 agcctctaca tggtgctttt cctctacaga taccgcaagg gagcccagca tctccgtagc
      661 ccaaatcttt ctttccagcc atcccctgag cgcaaagcca cccacagcat cctgtctctg
      721 gtgagctgct ttgtattaat ttattggttg aacaactgtg tcacccttta tagcttttat
      781 tcaagtgaaa gaattccaag agtggagtca ataaatgcga ttttgacaac atgctaccct
      841 accatctgcc cttttttatt catgaagaat aataaagtta ttttgcaatt catttcctca
      901 ttttctatac agagaatgac ctgttttcaa agttctatcc atggctaa
//
