LOCUS       NM_001166763             897 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 1 receptor 55 (Vom1r55), mRNA.
ACCESSION   NM_001166763
VERSION     NM_001166763.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 897)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 897)
  AUTHORS   Young,J.M., Massa,H.F., Hsu,L. and Trask,B.J.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
COMMENT     PROVISIONAL REFSEQ: This record is based on preliminary annotation
            provided by NCBI staff in collaboration with Janet Young. The
            reference sequence was derived from JAXUCZ010000001.1.
            
            Sequence Note: A set of diverse V1R queries was aligned via BLAST
            to the RGSCv3.4 assembly to find candidate V1R-containing genomic
            regions. Open reading frames (ORFs) for V1R genes and pseudogenes
            were then identified.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-897               JAXUCZ010000001.1  82795673-82796569
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..897
                     /gene="Vom1r55"
                     /note="vomeronasal 1 receptor 55"
                     /db_xref="GeneID:691791"
                     /db_xref="RGD:1595934"
     CDS             1..897
                     /gene="Vom1r55"
                     /note="vomeronasal 1 receptor Vom1r55; vomeronasal 1
                     receptor 1-like"
                     /codon_start=1
                     /product="vomeronasal 1 receptor 55"
                     /protein_id="NP_001160235.1"
                     /db_xref="GeneID:691791"
                     /db_xref="RGD:1595934"
                     /translation="MVQITVDDMVLKVVILLQMGTGLLANTYLLFMHSFVLLTGHRPK
                     PTELILSNLALANSLVLLSKGAQQVMEDLGLVHVLEGFGCQVFFYFHRVSRELLLCST
                     SLLSCFQAVTVSPRHGVWTGLRRWVYRHVGCSCFFCWSFNLVISTISPIEIKVFGDII
                     SNSSMGDGIACQYVVAVSGLCAIPLAILGALLMTLMVAASTHMVCLLHRHHQRVQHVR
                     SCNLTYRTSPEMRATHSILLLVAGFILFYFLNSIYIFYSIKSFSSYLWLQHSLKFFAT
                     CFPSLSPLVLIFQNSRTPSPCF"
     exon            1..897
                     /gene="Vom1r55"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggtgcaaa taactgttga tgatatggtc ttgaaggttg ttatcctgtt gcagatgggc
       61 acaggccttc tggcaaacac ttatttgctc ttcatgcata gcttcgtcct tctcacaggg
      121 cacaggccga agcctacaga gctcattttg tccaacttgg ctctggccaa ttccttggtt
      181 cttctctcca agggggcaca gcaggtgatg gaagatttgg gactggtgca tgttctggaa
      241 ggatttgggt gtcaagtctt cttttacttc cacagggtgt ctcgagaact tttgctctgc
      301 agcaccagct tgctgagctg ttttcaggca gtcacagtca gccccaggca tggagtgtgg
      361 acagggctca gacgctgggt ttataggcat gttggctgct cctgcttctt ctgctggagt
      421 ttcaatctgg tcatcagcac catctctccc atcgagataa aagtctttgg ggatatcatt
      481 agtaattcct caatggggga tggcattgct tgccagtatg tggtcgctgt gtctggattg
      541 tgtgcaatcc cgttagccat tctgggtgcc ctgctgatga cacttatggt ggcagccagc
      601 actcacatgg tatgtctcct gcacagacac caccagaggg tccaacatgt tcgaagttgc
      661 aacctcactt acaggacctc cccagagatg agggccactc acagcatcct actcttggtg
      721 gctggcttca tcctctttta cttcctgaat tcaatctaca tattttacag cataaaatca
      781 tttagctcct acctgtggct gcaacattcc ctgaagtttt ttgccacctg tttcccctcc
      841 ctgagtccct tggtactgat tttccagaat tccagaactc caagcccctg cttttag
//
