LOCUS       XM_039097314             954 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal 1 receptor 53 (Vom1r53),
            mRNA.
ACCESSION   XM_039097314
VERSION     XM_039097314.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086019) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..954
                     /gene="Vom1r53"
                     /note="vomeronasal 1 receptor 53; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:292607"
                     /db_xref="RGD:1359524"
     CDS             1..954
                     /gene="Vom1r53"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 1"
                     /protein_id="XP_038953242.1"
                     /db_xref="GeneID:292607"
                     /db_xref="RGD:1359524"
                     /translation="MDTVVYTDLNWGIMFLIQTTAGILGNSFLFHMYNFPFFTTQMVR
                     PTNLIINQLIISNHLVLLSKGIPQTVTSLGLTSFLEDAGCKFVLCLYRVARGVSLSTT
                     SLLSGFQAIKLHPNTSEWLSLRIRSSKWIGTCCFLCWMLQLMLNIHVTIIANAPQNTK
                     NLTSKGIQRYCYSTTPQRFVFVLLAMIITLSDTICLVIMALASGSMVLVLRKHKQQVQ
                     YIHRHSLSPKPAHEKRATRTILILVTMFLSFYPVAAILSLCITETVNPSHWLITMSVL
                     ISLAFPTLSPFVLNFTKTCAPQFCSVFWSKKMNRPTMASEF"
ORIGIN      
        1 atggatacag tagtttatac agacttaaac tggggaataa tgttcctcat tcagaccact
       61 gctggaatcc taggcaattc ctttctcttt catatgtata acttcccatt tttcactaca
      121 caaatggtga gacccacaaa cttgattatc aatcagctca tcatatcaaa ccacctggtc
      181 cttctctcca aagggatccc tcagacagtg acctctttgg ggttgacatc tttcctggaa
      241 gatgctgggt gcaaatttgt tctctgtttg tacagagtgg ccagaggtgt ctccctcagt
      301 accacgtccc tcctcagtgg ctttcaggcc attaagcttc accccaatac ttctgagtgg
      361 ctgagtctta gaattagatc ctcaaagtgg attggcacct gctgtttcct ttgctggatg
      421 ctgcagctca tgctcaatat acatgtaacc attattgcaa atgccccaca gaatacgaaa
      481 aacctgactt ccaaaggaat ccagagatac tgttactcca ccacccctca gagatttgtt
      541 tttgtattac tagcaatgat aataacccta agtgatacaa tatgtctggt catcatggcc
      601 ttggccagtg gctccatggt ccttgtccta cgcaagcata agcagcaagt ccagtacatc
      661 catagacaca gcctgtcccc aaagcctgca catgagaaga gagccacacg gactatcctg
      721 atcctagtga ccatgtttct ctccttttac cctgtagctg ccatcttatc actgtgcata
      781 acagagactg tgaatccaag ccattggctg attaccatgt ctgtgctgat ttccctggcc
      841 ttcccaacac tcagtccctt tgtgctgaat ttcaccaaaa cttgtgcccc tcagttctgt
      901 tctgtctttt ggtcaaagaa aatgaatcgc ccaactatgg cctctgagtt ttga
//
