LOCUS       XM_039097311             954 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal 1 receptor 51 (Vom1r51),
            mRNA.
ACCESSION   XM_039097311
VERSION     XM_039097311.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086019) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..954
                     /gene="Vom1r51"
                     /note="vomeronasal 1 receptor 51; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:108349838"
                     /db_xref="RGD:1359291"
     CDS             1..954
                     /gene="Vom1r51"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 1"
                     /protein_id="XP_038953239.1"
                     /db_xref="GeneID:108349838"
                     /db_xref="RGD:1359291"
                     /translation="MDVFVTIHLNWGMMFLIQTTAGILGNTFLFHQYNFPFFTTQVMR
                     PRNLILNQLIVTNNLVLLSKGIPQTLTTLGLAPYLGDAGCKSILYLYRVARGVSLITT
                     SLLSGFQAIKLHPNTSGWLSLRISSSEWIGTCCFLCWMLQLIVNIHVPNIVSATQNSK
                     NLTSKGLHRYCSTAGPESFIFFVAGVILPLNDIMCLFFMAWASGSMILVLHKHKQRVQ
                     YIHSHNLSSKSAREDRATRTILLLVTMFLSFYSLSSILSLCITQTENPSHWLLNTCIL
                     MSLGFPTLSPFVFICTYSHTSRCCFISNIKERQNPPTVLAF"
ORIGIN      
        1 atggatgtct tcgttacaat tcacttaaac tggggaatga tgttccttat tcagaccact
       61 gctggaatcc ttggcaatac cttcctcttt catcagtata acttcccatt tttcactaca
      121 caggtgatgc gacccaggaa cttgattctc aatcagctca ttgtaacaaa caacttggtt
      181 cttctctcca aagggattcc tcaaacattg accactttgg ggttggcacc ttacttgggg
      241 gatgctgggt gcaaatccat tctctacttg tacagagtgg ccagaggtgt ctccctcatt
      301 actacctccc tcctcagtgg ctttcaggcc attaagcttc accctaatac ctcagggtgg
      361 ctgagcctca gaattagttc ctcagagtgg attggcacct gctgtttcct ttgctggatg
      421 ctgcagctca tagtcaacat ccatgtacca aatattgtaa gtgccacaca gaatagtaaa
      481 aacctgactt ccaaaggact ccacagatac tgttccaccg ccgggcctga gagtttcatt
      541 ttctttgtag caggagtgat tttacccctg aatgatataa tgtgtctgtt cttcatggcc
      601 tgggcaagtg gctccatgat ccttgtccta cacaaacaca aacaacgagt ccagtacatc
      661 catagccata acctatcctc aaagtctgcc cgtgaagaca gagccacacg gactatcctg
      721 ctcctggtga ccatgtttct ctccttttac tctctatctt ccatcttatc actttgcata
      781 acccagaccg agaacccaag ccactggctg ctaaacacct gtatactgat gtcacttggc
      841 ttcccaacac tcagcccctt tgtattcatt tgcacttatt ctcatacttc tcgctgttgc
      901 ttcatttcta atataaagga aagacaaaat ccacctacgg tcttagcatt ttaa
//
