LOCUS       NM_001008918            4252 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus vomeronasal 1 receptor 50 (Vom1r50), mRNA.
ACCESSION   NM_001008918 XM_039100700
VERSION     NM_001008918.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4252)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 4252)
  AUTHORS   Young,J.M., Massa,H.F., Hsu,L. and Trask,B.J.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On or before Jun 24, 2022 this sequence version replaced
            XM_039100700.1, NM_001008918.1.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-4252              JAXUCZ010000001.1  81583682-81587933   c
FEATURES             Location/Qualifiers
     source          1..4252
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..4252
                     /gene="Vom1r50"
                     /gene_synonym="V1rg11"
                     /note="vomeronasal 1 receptor 50"
                     /db_xref="GeneID:494267"
                     /db_xref="RGD:1359168"
     exon            1..4252
                     /gene="Vom1r50"
                     /gene_synonym="V1rg11"
                     /inference="alignment:Splign:2.1.0"
     CDS             705..1682
                     /gene="Vom1r50"
                     /gene_synonym="V1rg11"
                     /note="vomeronasal V1r-type receptor V1rg11; vomernasal 1
                     receptor Vom1r50; vomeronasal 1 receptor, G11; vomeronasal
                     type-1 receptor 4"
                     /codon_start=1
                     /product="vomeronasal 1 receptor 50"
                     /protein_id="NP_001008918.1"
                     /db_xref="GeneID:494267"
                     /db_xref="RGD:1359168"
                     /translation="MWLNLSISGEKNMASEHLPMGILFFSQIAVGILGNWSILLHYVM
                     SVITGKCLMPKDQILKHLTLANSLVIISRVTPHIIVQLGLQYLLDDLLCKFTLYSNRV
                     SRGVSLHCTCLLSCFQAITISLSHSRLMTLTHSVSKYMIQFCSLTWLLHLFLSIKTAV
                     HVIGPNSNKNFTRKIKLGYCSAFAFGNSVTGLHLFFVCFTDCVYLSLMVWASVFMVNI
                     LYRHKSQLQYIHSTQHSFRVSPEDRATKTILILVFTFVLSYSMSFILVIYTVVFDNPR
                     LWIINIFAFLDTCFPTFCPFILISNNQSTSKDPFPCCSRRKFTIVTCVL"
ORIGIN      
        1 agaatgtagt ctcttctggc ttcccaggcg tgtctgcccc cctgaagctt tagctttcct
       61 tctcaaggga tttgggtgca gagaactgtt gaccaggccc ctcaggtccg ggccgtgtct
      121 ggactgcggg ggacctgctg cttgagtgtc cctatcttcc agttcccaga ggccctatcc
      181 agtttcttct tgggccagag atgtgggcgg gggggggcag tattggtggt gtttcctgct
      241 cttcagtctc aggagtgccc acctgtcagg gcagtgagct ctctctccct agggtttggg
      301 agcaatcttt aatatccatt tttgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
      361 ttttagtagc tgattacaag aatgaaccaa gtatactctt catattaata caccaccttc
      421 tttcagaaaa gttagaagaa tctattggat attcatttag gagaaaaagc aatagaggag
      481 ccttgaagac tatgaaacac tgtagaaagt atgaaaatta tgatttgaag gttacatcct
      541 ttgccttact cccatatttg atgacccaaa atgtgtttga acatggtttt tgtcttgatt
      601 gggtaatctg ctataagaca gacatttggc ctgatgagac aatcatgcaa tttaagctat
      661 gataaataga tgcacattta aatgatttct ttctggatgt attgatgtgg ttaaacttgt
      721 ctatctcagg tgaaaagaac atggcttctg aacacttgcc gatggggatt ttgttctttt
      781 ctcaaatagc tgtggggatc cttggcaatt ggtcaattct tcttcattat gtcatgtctg
      841 taatcactgg aaaatgtttg atgcccaaag atcagatttt aaagcatctg actttagcca
      901 attccttggt tattatctca agagtaacac ctcacataat agtacagctg gggttgcagt
      961 atctcctgga tgacctctta tgtaagttta ctctctacag caatagagtg tcccggggtg
     1021 tttccctgca ctgcacctgc cttttgagtt gcttccaagc aatcacaatc agcctcagcc
     1081 actccaggct gatgacactt acacactctg tctccaaata catgattcag ttctgctctc
     1141 taacttggct tctacatctg tttctaagca tcaagacagc tgtacatgta attggaccaa
     1201 atagtaacaa aaatttcacc agaaaaatca agttggggta ctgttcagca tttgcttttg
     1261 gtaatagtgt tactggacta catttgttct ttgtttgttt cactgactgt gtgtatctga
     1321 gcctcatggt atgggccagt gtcttcatgg tgaacattct ctataggcac aagagtcagc
     1381 tacagtacat tcacagtacc cagcattcct tcagagtctc tcctgaagac agagccacaa
     1441 aaactatctt gattcttgtg ttcacctttg tcctctccta ctcaatgtcc ttcatacttg
     1501 ttatctatac tgtggttttt gacaatccaa ggctgtggat aataaacata tttgcattct
     1561 tagacacatg cttccccaca ttttgcccct tcatccttat cagtaataac caatctactt
     1621 ccaaggatcc ttttccctgc tgtagcagaa gaaaatttac aatagtcact tgtgtgttat
     1681 gatagattca aatagtcttt catcaattat tggatattag actaactcac aaccagttat
     1741 tattaagcaa atcaatggct ctgtaaatta agtattgtcg actgttatat ctgtcataat
     1801 tctggctaaa caattatatg atactaagat acctctttgt tttcattcaa aatactctga
     1861 aattagaggc atcaaagaat ttcttatgcc ttcaggtagc caagcaggtc ttgaggtatg
     1921 aacttctgtg taggcacatg tcagagtctt gtcttactgc ttcaactgaa tggaagaaaa
     1981 gcagagtaag tgaaacatgg atctctggca actattgttt ttgtgtatgt atcaacttca
     2041 cttatgtttt gcatatgatc ttattttctg ggcagatggt tccacctcca gattccccta
     2101 ttggaagaag aatcaagtaa tgcctattta cattgattac tgtttttctt agagttacac
     2161 ttgaagccac agatactccc tagccatcct tatcctactg tgcaccattg tcaactgata
     2221 ctcagttact tgtgccctgt tcctctgtat gacagtctga gacaatgcac agctatggaa
     2281 agtaaactat atctctacag acattcctcc atattttatc ccattgcact catgagtgtt
     2341 acctaatttg tcttcacact tttgttttcc tcccatagaa gagttacttt ttaaaatttc
     2401 tcaatgtgtc acacattctg ttgaacctgt tcatggatat atctatttgt tccttcattc
     2461 atcgtgtatg tatttggaca catgattgtt aatgctgaaa atgccaagat ctaaaatcag
     2521 ctagaaaaca aacatgtgga gatgtctttg agggagcatc taagttggat taatggatgt
     2581 aggaggacac aatctaattc tgcatagcag ttaatccatt gtttaagtgt cttaggctga
     2641 ataaaatgag gaaaattgag aaccagcatg catctgtctc tgctctctga ctacagatgc
     2701 aaggcgttct gctgcctcag cctcctgatt ccatgacttt cattccatat gaactgtatc
     2761 ctcaaacttc aagttaaaat aaaccactcc aaaattaggt tgactttgtc atttttcatc
     2821 agaaaaatgt gaaaattaac aaggataaat aattcagtaa cttcttaaat tacgctgatt
     2881 aaaatcgtac aggtcatccc aatggccaaa gcatattcaa tgagagataa attctgagga
     2941 tttcttttgt ctcttcacat ttctttgaca tagatgttac agtgccttct agcagatgct
     3001 gacacttaat gcagtttgtg ggtgattgtc aactcaggct gatcccccag gtcttaggac
     3061 attatgcagc atgaggtcaa gagttttata acttaggtga gtaagacata cttagaattt
     3121 cagtattgca tattcatgag aaaaaatcca taacacagag aagacaaaac tatttcttct
     3181 tctctaaagt gaaagaaata caaatttaaa caatgtctaa atacattgaa atcaatgata
     3241 ataaataatt ttattcagtg taaaattgag aggtttccta ccatgatttt taagatttaa
     3301 gtaattctca tctgatcata tctaagtctg ttgaagtact tttttcttct tccacttctt
     3361 cttttcacta atttatatgt tcccagagga gggggcaatt gaagcccatg tttgtgtcta
     3421 gatagttgga ttatgtgaaa gaattggata ggttgttgag attaatcagt tccacaattt
     3481 cctagatagt agaagtctac ataaggtgag tatcatttag agaagaatgt gttgaaaagt
     3541 tgaatgttgt ttctaatgtt gcaggacaat aattctggca ttgtgcaggc tgagacaaga
     3601 agattgctgt gaatctgagg caagtctagg gaagacagtg agcctgaaac aactctaggt
     3661 tactttctga gaccaagtga cccaaaacaa caaaaccaaa taaagcattt aaaaataccc
     3721 cgccagaacc ataaccaaca aaaatttttg aggatccata attaaaattt ttcctagtta
     3781 aaaaatagta ggactcagta ttgccattgg tcctgcttac cctccagaat gtgacaggaa
     3841 acaaaatcta gtacagacct ggaacttcat acctaatgga taactttcac agtgcaggga
     3901 attctattta tactatggga ggagcaaaat taatcatcag tcatatccag cagtgacact
     3961 gtgcactgta acaatgcctg ccctgctggg acatacccat ggcataaacc tcatgggaac
     4021 aactaataac ctactgcttg gatttaaatc ctgctctaga agcttgaaac catatttggc
     4081 tgacaggagc cataatgggg caagttaata actagcaggt gatttccctg agatggcctg
     4141 cttcagattg ttatataatc tgtgacaggt ttgccttcat taagcgagct ataagggaat
     4201 tcattttaca aaagattcct gctattaata tctgttatta ttaaacatat at
//
