LOCUS       XM_039097175             942 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal type-1 receptor 4-like
            (Vom1r4l), mRNA.
ACCESSION   XM_039097175
VERSION     XM_039097175.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086019) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..942
                     /gene="Vom1r4l"
                     /note="vomeronasal type-1 receptor 4-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 Proteins"
                     /db_xref="GeneID:120098107"
                     /db_xref="RGD:41232042"
     CDS             10..942
                     /gene="Vom1r4l"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 4"
                     /protein_id="XP_038953103.1"
                     /db_xref="GeneID:120098107"
                     /db_xref="RGD:41232042"
                     /translation="MDSWNLTIRIIFLSQTTIGILGNFSLMFYYLILYYRQGTLKPKD
                     LILMHIMAANAVIILSSGVPTTMSVFRQKPFLNDFACKLLLYIQGFGRSVSIGATCLL
                     SVFQVMKISPRESCLTDHKMRTANYICCSTSLLWVLYLLIHSTFFMYTFIKRNSKNMT
                     KELEYAFCSIVGQDDIIESLYAALVVCPEVLFSVLITWSSTSMIVFLYQHKQRVQHIH
                     SSHGSSRNSPEFRATQNILALVSTFLAFYTLSSISRGCITFSHNHYLWLVNITPIASL
                     FFPSFAPFVFISHYSIVSRFCLVSTLNKNLLLLF"
ORIGIN      
        1 aatcacagca tggactcctg gaatctgaca atcagaatca tttttttgtc tcaaactaca
       61 attggaattc taggaaactt ctctcttatg ttctactacc taatccttta ctacagacaa
      121 ggcacattaa aacccaaaga tttgattctt atgcacataa tggcagccaa cgctgtgatc
      181 attctctctt caggagtgcc caccacaatg tcagttttca gacagaagcc attcttgaat
      241 gattttgcat gcaagctcct attgtacatt caaggatttg gcaggagtgt gtccattggt
      301 gccacctgcc ttttgagtgt tttccaggtc atgaaaatca gccccaggga atcatgtttg
      361 acagatcata aaatgagaac tgccaactac atttgttgct ccacttctct cctctgggtt
      421 ttgtatttgt tgatacattc cactttcttt atgtacacat ttatcaaaag gaatagcaaa
      481 aatatgacaa aagaactaga atatgcattc tgctccattg tagggcaaga tgatatcatt
      541 gaatcactct atgctgcact ggtggtgtgc cctgaagtcc tcttttctgt gctcatcact
      601 tggtccagta catccatgat tgtctttctg taccaacaca agcagagggt tcaacacatt
      661 cacagttctc atggttccag cagaaattct cctgagttca gagccactca aaatatactg
      721 gccctggtgt ctaccttttt ggctttttat actctctctt caatctcaag aggctgcatt
      781 actttttcac ataatcacta tttgtggctg gtgaacatca cacccattgc ttctctgttt
      841 tttccctctt ttgcaccctt tgtttttata agtcattact ccattgtgtc cagattctgt
      901 ttggtctcga cattaaataa aaacctctta ctattatttt aa
//
