LOCUS       NM_001008916            3690 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus vomeronasal 1 receptor 47 (Vom1r47), mRNA.
ACCESSION   NM_001008916 XM_039100738
VERSION     NM_001008916.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3690)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 3690)
  AUTHORS   Young,J.M., Massa,H.F., Hsu,L. and Trask,B.J.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On or before Jun 24, 2022 this sequence version replaced
            XM_039100738.1, NM_001008916.1.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3690              JAXUCZ010000001.1  81470574-81474263   c
FEATURES             Location/Qualifiers
     source          1..3690
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..3690
                     /gene="Vom1r47"
                     /gene_synonym="V1rg14; V1rg9"
                     /note="vomeronasal 1 receptor 47"
                     /db_xref="GeneID:494266"
                     /db_xref="RGD:1359700"
     exon            1..3690
                     /gene="Vom1r47"
                     /gene_synonym="V1rg14; V1rg9"
                     /inference="alignment:Splign:2.1.0"
     CDS             681..1595
                     /gene="Vom1r47"
                     /gene_synonym="V1rg14; V1rg9"
                     /note="vomeronasal V1r-type receptor V1rg14; vomeronasal 1
                     receptor, G9; vomernasal 1 receptor Vom1r47; vomeronasal
                     V1r-type receptor V1rg9; vomeronasal type-1 receptor 3"
                     /codon_start=1
                     /product="vomeronasal 1 receptor 47"
                     /protein_id="NP_001008916.1"
                     /db_xref="GeneID:494266"
                     /db_xref="RGD:1359700"
                     /translation="MISPNLPMGIFLFFQIVIGMLGNCSILCYYVTFLFSRKHLMPKD
                     LIMEHLTFANCLSIISKGIPQILSDFGFKESLDDIGCKFVMYIYRVTRGMSLYAMCLL
                     SCFQAITISPSNSRWMMLKHRAVKYIGSSCLVNWFVHLLLNIITPVKVTVPTYSKNVT
                     NMNSYGYCSWFAPRNMAIALYMFLLCFYDGLCLGLMACSSVYMVSILYKHKRQVKHIY
                     TAQHFLKVSPEDRATQTILILVCTFIISYTISSIRVIFTTYSKVSVIWRVSIFIFLEI
                     CFSIFCPFVLISNIKCSFRLFLPFCGKS"
ORIGIN      
        1 tgtctactgg tcttcagctg ttcctgtggg tgtgtttcct gagtccacca ggcaggtcac
       61 ttggagcaga aaagttggtc ttacctgtgg tcctgagcct gaagttgctc ctggggcact
      121 gtgtttgagg tctccgtggg ggtggcaacc agaagggcct gccccgcctt ttgccaggcc
      181 ctgtgcgctg gggtcccaga tggcattaga tgttttcctc tggagtcaga aatgtgggca
      241 gaatgtagtc tcttctggtt tctccagagt gtctgcccct ctgaagtttt agctctccct
      301 accacggaat ttgggtgcag ggagctgttg attggttccc ttcaggtctg tgtggtgtct
      361 ggacagcaag gagcctgccc ctttcttcct gttcccagaa gtcctataca gtttcctctt
      421 gggccaggga tgtgggcagg ggtgtgcagt atttgtggtc cctctcgctg tgcagtctca
      481 ggagtgccca cttctccggg tgcagtgagc tctctcgccc atggagtttg agagcaggga
      541 gctgtgggcc gggttttctt aatttatctt tttaatagga atgtaaatgc cttgatgatg
      601 ctgaactgaa cctgaacctg taagaaggcc ccaattaaat gttgtttttg taagaaaaaa
      661 gaagaagaaa ataaaagaaa atgatttctc caaacttgcc aatgggaata ttcctcttct
      721 tccagattgt aattggaatg cttggcaatt gctcaatact atgttattat gtcaccttcc
      781 tattcagtag aaaacattta atgcctaaag atctgattat ggagcactta acttttgcca
      841 actgtttgtc tatcatctca aaaggcattc cacagatact gtcagatttt ggttttaaag
      901 aatccctgga tgatattgga tgcaaatttg taatgtatat ttaccgagta acaagaggga
      961 tgtctctgta tgcaatgtgc ctactgagtt gcttccaagc aatcacaatc agtcccagca
     1021 actctaggtg gatgatgctt aaacacagag cggtgaagta tattggttct tcctgcttag
     1081 tcaattggtt tgtgcatttg cttttaaaca tcatcactcc agtaaaagtg acagtcccca
     1141 cttacagcaa aaatgtgaca aacatgaata gttatggata ctgctcatgg tttgctccca
     1201 gaaatatggc aattgcactg tatatgttct tactgtgctt ctatgatggc ctgtgtctgg
     1261 gtctcatggc ctgctcaagt gtctatatgg ttagtattct ctacaaacat aagagacaag
     1321 tcaaacatat ctatactgct caacactttc tgaaagtctc acctgaggac agagctaccc
     1381 aaactattct catcctggtg tgcacattta tcatctctta tacaatctct tctatacgtg
     1441 taatctttac aacctactcc aaagtttcag tgatttggcg agtaagtata tttatatttc
     1501 tagaaatatg cttttccata ttttgtccct ttgttcttat tagcaatatt aagtgtagtt
     1561 tcagactatt tttacccttt tgtggtaaga gctaactcca tccaaacatt gcatgtttaa
     1621 aattttttat tatatacata catatataaa tgtgtgtgtg tgtatgtgta tacctcagtg
     1681 taaatatagg tatcacatag attatctgtg ctcatatctg caagaagagt atattggatc
     1741 ctctgaaact ggaaatacat tggagccata agccacctga tgtggtttct gcaagctgaa
     1801 ctcagtttcc tttgcaaaat cattataaaa cttttccaca ctgatccctc tctctacctc
     1861 caagcatttg tctattgctt ttcaaatata ggcattacaa ctcttcagct atcatctggt
     1921 ctgaaaatgt tgtagaaaaa tgaatgagaa aatcgcctta caatattagt cagtgtcaga
     1981 aagacaaata ttacatgtac tttcacgtga aatcaaggca caaaggaaaa tgaagggaaa
     2041 atatggatta ttgagaagta taggctaaga tttttcaaaa tctactctag taagcattct
     2101 taaacacttc gatctcactt ctagtccatg gaccaatgaa tggttggaga gaaagatgtt
     2161 taataggaca agggggatat ggacctgttt agaagtattt cttcggagga ttccaatctt
     2221 tgttgtcagg ggtatcagca gttcagtcta aaatattaac ataaataagt agtggcagtc
     2281 caatccaatt gacaaatacc aaacaagaat cagtagcagc agctggatcc agaagaaacc
     2341 acaaggatcc tctgaattga catgagtctg cagaagcagc aagaaccagc tgaaatacca
     2401 caagaatttc tttgacacat ttcgctctac aaattcacta caagatcagt gaagatcagc
     2461 aaaaggttgc ataacatact aatgcaaaaa aatcctcatt gtctgtgtgg ttatatttat
     2521 atttctaact atcagagggt gtctcaagtg tctgtttcag caaaatatca catgtattct
     2581 tgcaagaaag cttccagaaa aataccacgt gccatgccca ttctcaacaa acatcctctt
     2641 acatatcagt ttcagcaaaa caccttcact aaagagagtt ccaagaaaca tatcgtatgg
     2701 caaaactgag ttgttagagt aatcaaaaat ttccacttca gagtggaatt tttcagagaa
     2761 aaattgggag agtaaaaaat gggagatata gatgatataa tgatggataa atatgacaaa
     2821 gtaacttaat acacataaat gaaagcaaca taatgtaatc cattactatg tacaattaat
     2881 gaatgcttta aaatataaag aattaaaaat tgtcactatc ccctgtgata tattaggttc
     2941 attttactaa cataattatc ttcattgcct ctgtctccta cgtgtcatat gatataacat
     3001 ccactttcta aaagcttgat aaaaatattt caacggttta taaattgttc ttggaataaa
     3061 cttttttctt cagaaaaata tacctctgga ttctctctct ctctctcttg aggaattaca
     3121 ctagtttttt tcagccttta gtttttttca tttttgtttt attggatata tttctttatt
     3181 tatatttcaa atgttattac ttttcttggt tccctgtcca taagccccct atcccctccg
     3241 actcccccat aaggttgttc ctgctattca cccgcactta ccaccatccc ctaaacacta
     3301 ccctgcactg ggagtccaac cttggcaaga ccaagggctt ctccttccac tggtgcccaa
     3361 caaggacctc ctctactaca tatgaaggtg gaaccacggg tcagtccagg tacagtgttt
     3421 gagtagtggt ttagtcacta gaagctctgg ttgtttggca ttgttgttct tatggggatg
     3481 caagcacctt cagctctttc agtcctttct ctaattcctc caacaggggt cccattctta
     3541 gatcactggt ttgctgctag tgttcatctc tgtattggac atgctccgga tgtgtctctc
     3601 aaaagagatc taggggctgg ggatttagct cagtggtaga gcgcttacct aggaagcaaa
     3661 aggccctggg ttcggtcccc agctccgaaa
//
