LOCUS       XM_039097308             951 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal 1 receptor 46 (Vom1r46),
            mRNA.
ACCESSION   XM_039097308
VERSION     XM_039097308.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039097308.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..951
                     /gene="Vom1r46"
                     /note="vomeronasal 1 receptor 46; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:494286"
                     /db_xref="RGD:1359306"
     CDS             1..951
                     /gene="Vom1r46"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 4"
                     /protein_id="XP_038953236.1"
                     /db_xref="GeneID:494286"
                     /db_xref="RGD:1359306"
                     /translation="MWLNLFTSGKNNMIPENLPMGILFFSQTAMGILGNWSILLHYGI
                     SINTGKSLMSKDQILKHLTLANALVIISRVIPHIMVQLGLQYLLNDLLCKLTLYSNRV
                     SRGVSLHCTCLLSCFQAITINLSHSRWAKLAHSFSKYTVQFCSLSWLVHLLLNIRAAI
                     HVIGPNTNKNFTRKIKLGYCSAFPLGNTITVLHLFLLCFTDGLYLSLMVWASVSMVSI
                     LYRHRSQVQYIHSPQHSLRMSPEGKATKTILILVCTFVFSYSMSFILVIYTVVFNNPR
                     LWLINIFTFLDTCFPTFCPFILISNKQSTPKNHFSCCSRT"
ORIGIN      
        1 atgtggttaa atttatttac ctcaggtaaa aacaacatga ttcctgagaa cctgccaatg
       61 gggattttgt tcttttctca aacagctatg gggatccttg gcaattggtc aattcttctt
      121 cattatggaa tatctataaa cactggaaaa agtttgatgt ccaaagacca gattttaaag
      181 catctgactt tagccaatgc cttggttatt atctcaagag taatacctca cataatggta
      241 cagctggggt tgcagtatct cctgaatgac ctcttatgta aacttactct ctacagtaat
      301 cgagtgtccc ggggtgtttc actgcactgc acctgcctct tgagttgttt ccaagcaatc
      361 acaatcaatt tgagccactc caggtgggcg aagcttgcac actcattttc caagtacaca
      421 gttcagttct gctctctaag ctggcttgtg catcttcttt taaacattag ggcagctata
      481 catgtgatag gaccaaatac taacaaaaat ttcaccagaa aaatcaagtt ggggtattgt
      541 tccgcattcc ctcttggcaa tactataact gtactacatc tattcttgct ttgtttcact
      601 gatggtctat atttgagtct catggtatgg gccagtgtct ccatggtgag cattctttat
      661 aggcacagga gtcaggtaca gtatatccac agtccccagc attccctgag aatgtcccct
      721 gaaggcaaag ccacaaaaac catcttgatc cttgtgtgca cctttgtctt ctcctactca
      781 atgtccttca tactagtaat ctatactgtg gtttttaaca atccaaggct gtggctaata
      841 aacatattta cctttttaga cacgtgcttt cctacatttt gtccctttat ccttataagt
      901 aataagcaat ctactcccaa gaatcatttt tcctgctgta gcagaacata a
//
