LOCUS       XM_039097305             921 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal 1 receptor 41 (Vom1r41),
            mRNA.
ACCESSION   XM_039097305
VERSION     XM_039097305.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086019) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..921
                     /gene="Vom1r41"
                     /note="vomeronasal 1 receptor 41; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 27
                     Proteins"
                     /db_xref="GeneID:494261"
                     /db_xref="RGD:1359462"
     CDS             7..921
                     /gene="Vom1r41"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 4"
                     /protein_id="XP_038953233.1"
                     /db_xref="GeneID:494261"
                     /db_xref="RGD:1359462"
                     /translation="MAFENIVLGIFLFSQITVGMIGNSSILVYYVILKLTGKHLMPKD
                     LIIEHLTFANCLFIISKGIPQTLSDYGYKNFLDDFGCKLIIYIYRITRGMSLYAMCLL
                     SCFQAITITQKNSRWMMLKHRVTKYLGPSCSFSWLVQLLLNILAATRVSGPRYNKNTT
                     SRMIHGYCSWFASGNFATVMYLFLLCFSDAVCLGLMAYSSVSMVSILCRHKKQVKHIH
                     TAQHFLKVSPEDKATQTILILVCTFVLSYSFSSLLVIFTTYSKYPMLWGVSIFTFLEI
                     CFPIFCPFVLISSMKSRCSIFLPCFGKS"
ORIGIN      
        1 ctcaaaatgg cttttgaaaa tattgtacta ggaattttcc tcttctccca gattacagtg
       61 ggaatgattg gcaattcctc aatactagtt tattatgtca ttttgaaact cactggaaaa
      121 catttaatgc ctaaagacct gatcatagag cacttgactt ttgccaattg cctgtttatc
      181 atctcaaaag gcattccaca gacactgtca gattatggat ataaaaattt tctagatgac
      241 tttggatgta aattgataat atatatttac cgaataacca ggggaatgtc cctttatgct
      301 atgtgcctat tgagttgctt ccaagcaatc acaatcaccc agaaaaattc cagatggatg
      361 atgcttaaac acagagtcac caagtacctt ggtccctctt gctcattcag ctggcttgta
      421 caattattgc taaacatctt ggctgcaaca agagtgtcag gccctcgtta caacaaaaat
      481 acaactagca ggatgattca tgggtactgt tcatggtttg cttcaggcaa ttttgcaact
      541 gtgatgtatt tattcttatt gtgcttctct gatgctgtgt gtctgggtct catggcctat
      601 tcaagtgtct ccatggtgag tatcctctgc agacataaga aacaagtcaa acatatccat
      661 actgctcaac actttctaaa agtctctcct gaagacaaag ccacacaaac tatcctcatc
      721 ctggtgtgca catttgttct atcttactca ttctcctctc ttttggtaat ctttacgacc
      781 tactccaaat atccaatgct atggggagta agtatattta cattcctaga aatatgcttt
      841 cccatatttt gcccctttgt tctcatcagc agcatgaagt ctaggtgcag tatattttta
      901 ccctgctttg gtaagagtta g
//
