LOCUS       XM_006228159             915 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal 1 receptor 40 (Vom1r40),
            mRNA.
ACCESSION   XM_006228159
VERSION     XM_006228159.2
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086019) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006228159.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..915
                     /gene="Vom1r40"
                     /note="vomeronasal 1 receptor 40; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 29
                     Proteins"
                     /db_xref="GeneID:102551504"
                     /db_xref="RGD:1359184"
     CDS             1..915
                     /gene="Vom1r40"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 4"
                     /protein_id="XP_006228221.2"
                     /db_xref="GeneID:102551504"
                     /db_xref="RGD:1359184"
                     /translation="MTSENVAMGIFLFSQITVGMLGNSSILFYYVILLFTGKSLMPKD
                     LIIQHLTFANCLSIISRGIPQTLADYGFKNILDDIACKLIVYIYRITRGMSLYAMSLL
                     SCFQAITISPNHSRWIMFKHRVIKYIGPSCSVSWLVHVLLNIVTPARVSGPSYKNNVT
                     NVVSYGYCSWFASGNFATALYMLLLCFSDGLCLGLMACSSVSMMSILYRHKRQVKHIH
                     NGQYFLKQSPENRATQTILILVCTFVVSYSFSSIVVIFTTYSKYPMLWGISVFTFLEI
                     CFPIFCPFVLLINIKPISSLLLPCSVKR"
ORIGIN      
        1 atgacttctg aaaatgttgc aatgggaatt tttctcttct cccagattac agtggggatg
       61 cttggcaatt cttctatact attttattat gtgattttgt tgttcactgg aaagagttta
      121 atgcccaaag acctgattat tcagcacttg acatttgcca actgcttgtc tatcatctca
      181 agaggtattc cgcagacatt ggcagattat ggatttaaaa atatcctgga tgacattgca
      241 tgcaaactga tagtgtatat atacagaatt acaaggggga tgtcccttta tgcaatgtcc
      301 ctactgagtt gcttccaagc aatcacaatc agccctaatc actccagatg gataatgttt
      361 aaacacagag tcatcaagta cattggtcct tcctgttcag tcagttggct tgtacatgtg
      421 cttctaaaca tcgtgactcc agcaagagtg tcaggcccca gttacaagaa taatgtaact
      481 aatgtggtga gttatgggta ctgttcatgg tttgcttcag gcaattttgc aactgcactg
      541 tatatgttgt tactatgctt ctctgatgga ctgtgcctgg gtctcatggc ctgctcaagt
      601 gtctccatga tgagtatact ctacagacac aagagacaag tcaaacatat tcataatggt
      661 caatattttc taaaacaatc accagaaaac agagccaccc aaacaatcct catcctggtg
      721 tgcacatttg tcgtctctta ctcattctct tctattgtgg ttatctttac aacctactct
      781 aaatatccaa tgctatgggg aataagtgta tttacattcc tagaaatatg ttttcccata
      841 ttttgtccct tcgttcttct catcaacatt aagcctattt ccagcctgct tttaccctgc
      901 tctgttaaga gatag
//
