LOCUS       XM_039097017             897 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal 1 receptor 4 (Vom1r4),
            mRNA.
ACCESSION   XM_039097017
VERSION     XM_039097017.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086019) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..897
                     /gene="Vom1r4"
                     /note="vomeronasal 1 receptor 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:494236"
                     /db_xref="RGD:1359091"
     CDS             1..897
                     /gene="Vom1r4"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 4"
                     /protein_id="XP_038952945.1"
                     /db_xref="GeneID:494236"
                     /db_xref="RGD:1359091"
                     /translation="MYLKDLIIGIVFLLQSTVGILGNFSLLSCYLINYYIEHKIKTSN
                     LILLHLFTANFLILLSKGLLHTVHTFGIKGFINDFGCKLLFYIQRLGRNMSISTTCFL
                     SVFQAITLSPRNSFWMNLKVKVPHHIGLFTSLCWILYMALNMIFPVYLDSKENRKNLT
                     HETPLKYCSNVAHDDFMSLFYTTTIVLPEILFSFIIIWSSSSMVVILYMHRQNVQHIH
                     SITVSSRTSPESRATHRILALMFTFIGFYALSSILQGWIALVYNPGWWLINITAIISM
                     CFPTLGPFVINRDPTLPALCSP"
ORIGIN      
        1 atgtacctca aggatttgat aataggaata gtgttcttac ttcagagtac agttgggatt
       61 ttgggaaatt tctctcttct ttcctgctac ctgattaatt actatattga acataaaata
      121 aagacttcaa atttaattct tttacaccta ttcacagcca actttttgat ccttctttct
      181 aaaggactgc tccatacagt gcatactttt gggataaaag gatttatcaa tgactttggc
      241 tgtaaattac ttttttatat tcaaagactg ggcagaaata tgtccattag taccacctgc
      301 ttcttgagtg tcttccaggc aatcaccctc agtcctagga actctttttg gatgaacctt
      361 aaagtcaaag ttccacatca tattggtctt ttcacttctc tttgctggat tctctacatg
      421 gcattaaaca tgatttttcc tgtttatttg gatagcaagg agaacagaaa gaacctgaca
      481 catgaaactc ctctcaaata ttgctctaat gtagctcatg atgactttat gagcctattc
      541 tacactacaa ctattgttct tcctgaaatt ttgttttctt tcattatcat ctggtcgagc
      601 agctccatgg ttgtcattct ctatatgcac aggcaaaatg ttcaacatat ccatagcatc
      661 actgtttcct ccagaacatc ccctgagtcc agagctactc acaggatact ggctctcatg
      721 ttcaccttca taggttttta tgccctctct tccatcttac aaggctggat tgctcttgta
      781 tataatcctg gttggtggct gataaacatc acagcaatca tttctatgtg ttttcctact
      841 ttgggacctt ttgtgattaa tcgtgaccca actttgccag cattatgctc gccatga
//
