LOCUS       XM_039097236             942 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal 1 receptor 31 (Vom1r31),
            mRNA.
ACCESSION   XM_039097236
VERSION     XM_039097236.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039097236.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..942
                     /gene="Vom1r31"
                     /note="vomeronasal 1 receptor 31; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     Proteins"
                     /db_xref="GeneID:494312"
                     /db_xref="RGD:1359179"
     CDS             10..942
                     /gene="Vom1r31"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 4"
                     /protein_id="XP_038953164.1"
                     /db_xref="GeneID:494312"
                     /db_xref="RGD:1359179"
                     /translation="MDFWNLAIRIIFLSQIIIGILGNVSLLFYYLVLYYREFTLKSTE
                     LILMHLMVANIIIIFSAGVPQTMTIWGMKQFLNDFGCKLLLYIHAVGRSVSICTTCLL
                     SVFQAMTIRPQKFCGNDHKVTMERYLGCFISFLWVLYFLVNFIFLVYTYIKKNSNNET
                     RKRDFGYCSTVGSDKISDSLYATLVMCPEVFFSVLIAWSSGSMIVILYRHKQKVKYIY
                     STHVSRRDYPESRATQNILAQMFTFLAFYTLSSTLRGSIALLSNHSWWLMNINHFTSL
                     CFPSFGPFVLMSHYSIVSRFILFWLRKNCSNFLL"
ORIGIN      
        1 aaacatagaa tggacttctg gaatctggca atcagaataa ttttcttatc acaaattata
       61 ataggaattc tcggaaatgt gtctcttttg ttctattacc tagtccttta ttatagagaa
      121 ttcacattaa agagcacaga gttgattctc atgcacctaa tggtagccaa tatcataatc
      181 attttctctg ctggagtgcc ccaaacaatg accatttggg gaatgaagca gttcctgaat
      241 gattttggat gtaagcttct attgtatatt catgcagttg gtcgaagtgt gtccatttgc
      301 accacctgtc ttttaagtgt cttccaggcc atgaccatac gtccccaaaa attctgtggg
      361 aatgatcata aagtcacaat ggaaagatat cttggatgtt tcatttcctt cctttgggtc
      421 ttgtacttct tggtaaattt cattttcctt gtgtacacat atatcaaaaa gaatagcaat
      481 aatgagacaa gaaaacgtga ttttggctac tgttccactg taggaagtga taaaatcagt
      541 gactcactct atgcaacatt ggtgatgtgc cctgaagtct tcttttctgt tctcattgca
      601 tggtccagtg gctccatgat tgtcatccta tatagacaca agcagaaggt taaatatatc
      661 tatagcactc atgtttctag gagagactat cctgagtcca gagccactca gaatatcctg
      721 gcacaaatgt ttaccttctt ggctttttat actctctcct ccaccttaag aggttccatt
      781 gctctcttgt ctaatcacag ttggtggctg atgaacatca atcacttcac ttctctgtgt
      841 tttccatctt ttggaccctt tgttcttatg agccattact ccattgtttc cagattcatt
      901 ttgttttggt taagaaaaaa ctgttctaat tttttactat aa
//
