LOCUS       XM_039097009             897 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal 1 receptor 3 (Vom1r3),
            mRNA.
ACCESSION   XM_039097009
VERSION     XM_039097009.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086019) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..897
                     /gene="Vom1r3"
                     /note="vomeronasal 1 receptor 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:494237"
                     /db_xref="RGD:1359495"
     CDS             1..897
                     /gene="Vom1r3"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 4"
                     /protein_id="XP_038952937.1"
                     /db_xref="GeneID:494237"
                     /db_xref="RGD:1359495"
                     /translation="MYLKDLIIGIVFLLQSTVGSLGNVSLLSCYLINYYIEHRMKTSS
                     LILSNLFTANFLILLSKGLLHTVQTFGIKGFINDFVCKFLLYIQRLGRNVSISSTCFL
                     SVFQAITISPRNSFWMNLKAKVPHHIGLFTSLCWILYMVLNMIFPVYMYNKENRKNLT
                     QKHHLKYCSTVVHDHFISSLYTTIIVLPEILFSFIIIWSSSSMVVILYMHRQNVQHIH
                     SITVSSRTSPESRATHRILALMFTFIGFYALSSVLQGCIALVYNPGWWLVNITAIISM
                     CFPSLGPFVMNHDSPFPRLCFT"
ORIGIN      
        1 atgtacctca aggatttgat aataggaata gtgttcttac ttcagagtac agttgggagt
       61 ctaggaaatg tctctcttct gtcctgctac ctgatcaatt actatattga acatagaatg
      121 aagacttcaa gtttgattct ttcaaaccta ttcacagcca actttttgat tcttctttct
      181 aaaggactgc tccatacagt gcaaactttt gggataaaag gatttatcaa tgactttgtc
      241 tgcaaattcc ttttgtatat tcaaagactg ggcagaaatg tgtccattag ttccacctgc
      301 ttcttgagtg tcttccaggc aatcaccatc agtcctagga actctttttg gatgaacctt
      361 aaagccaaag ttccacatca tattggtctc ttcacttctc tttgctggat tctctacatg
      421 gtattaaata tgatttttcc tgtgtatatg tataacaagg agaacagaaa gaaccttaca
      481 caaaaacatc atctgaaata ttgttccact gtagttcatg atcacttcat aagctcatta
      541 tatactacaa ttattgttct tcctgaaatt ttgttttctt tcattatcat ctggtcgagc
      601 agctccatgg ttgtcattct ctatatgcac aggcaaaatg ttcaacatat ccatagcatc
      661 actgtttcct ccagaacatc ccctgagtcc agagctactc acaggatact ggctctcatg
      721 ttcaccttca taggttttta tgccctctct tccgtcttac aaggctgcat tgctcttgta
      781 tataatcctg gttggtggct ggtgaacatc acagcaatca tttctatgtg ttttccttct
      841 ttgggacctt ttgtgatgaa tcatgattca ccttttccga gattatgctt tacatga
//
