LOCUS       XM_039097204             966 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal 1 receptor 28 (Vom1r28),
            mRNA.
ACCESSION   XM_039097204
VERSION     XM_039097204.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086019) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..966
                     /gene="Vom1r28"
                     /note="vomeronasal 1 receptor 28; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 19
                     Proteins"
                     /db_xref="GeneID:494308"
                     /db_xref="RGD:1359632"
     CDS             34..966
                     /gene="Vom1r28"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 4"
                     /protein_id="XP_038953132.1"
                     /db_xref="GeneID:494308"
                     /db_xref="RGD:1359632"
                     /translation="MGFWNLTIKIIFLSQTTIGILGNFFLMFYYLILYYRQGTLKPTD
                     LILMHIMAANAVIILSSGVPSTMSAFRRKPFLNDFACELLLYIQAFGRSVSIGATCLL
                     SVFRVMKISPRESCLTDHKMRTANYICCSTSLLWVLYMLIHSIFFMYTFIKRNSKNMT
                     KELEFAFCSVVRQDDIIESLYAALVMCPEVLFSMLITWSSTSMIVILYRHKQRVQHIH
                     RSHGSSRNSPEFRATQNILALVSAFLAFYTLSSILRGCIIFSHNHYLWLVNITPIASL
                     FFPSFAPFVFISHYSIVSRFCLVSTLNKNLLLLF"
ORIGIN      
        1 aatattctaa aaaaaagtgt gtcaaatcac agcatgggct tctggaatct gacaatcaaa
       61 atcattttcc tgtcacaaac tacaattgga attctaggaa acttctttct tatgttctac
      121 tacctaatcc tttactacag acaaggcaca ttaaaaccca cagatttgat tcttatgcac
      181 ataatggcag ccaatgctgt aatcattctc tcttcaggag tgcccagcac aatgtcagct
      241 ttcagacgga agccattctt gaatgatttt gcatgcgagc tcttattgta tattcaagca
      301 tttggcagga gtgtgtccat tggtgccacc tgccttctga gtgttttccg ggtcatgaaa
      361 atcagcccca gggaatcgtg tttgacagat cataaaatga gaacagccaa ctacatttgt
      421 tgctccactt ctctcctctg ggttttgtat atgttgatac attccatttt ctttatgtac
      481 acatttatca agaggaatag caaaaatatg acaaaagaac tagaatttgc attctgctcc
      541 gttgtaaggc aagatgatat cattgaatca ctctatgctg cactggtgat gtgccctgaa
      601 gtcctctttt ctatgctcat cacttggtcc agtacatcca tgattgtcat tctgtaccga
      661 cacaagcaga gggttcaaca cattcacagg tctcatggtt ccagcagaaa ttctcctgag
      721 ttcagagcca ctcaaaatat cctggccctg gtgtctgcct ttttggcttt ttatactctc
      781 tcttcaatct taagaggctg cattattttt tcacataatc actatttgtg gctggtgaac
      841 atcactccca ttgcttctct gttttttccc tcttttgcac cctttgtttt tataagtcat
      901 tactccattg tgtccagatt ctgtttggtc tcgacattaa ataaaaacct cttactatta
      961 ttttaa
//
