LOCUS       XM_039100202             987 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal 1 receptor 20 (Vom1r20),
            mRNA.
ACCESSION   XM_039100202
VERSION     XM_039100202.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; corrected model.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..987
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..987
                     /gene="Vom1r20"
                     /note="vomeronasal 1 receptor 20; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:494225"
                     /db_xref="RGD:1359652"
     CDS             1..987
                     /gene="Vom1r20"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /codon_start=1
                     /transl_except=(pos:37..39,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: vomeronasal type-1 receptor
                     4"
                     /protein_id="XP_038956130.1"
                     /db_xref="GeneID:494225"
                     /db_xref="RGD:1359652"
                     /translation="MPLMPHVPLLDPXVQTSGNDEMTARNMALGIIFLSQTAFGLLSN
                     SSVFFNFLVIYFSRYKLNSTDWILNYIVVANFLTLLCKGVPQTMAAFGLKDFLSDFGC
                     NLLFYFHKMGRSTCICSSSLLSVFQANTISNRNFRWEEFKTKSSKVSGFFLCLCCILN
                     ILMNTYNLFYMSGKLCYRNVTILQDFGFCTACLDKTGQILYTVFLPLPDAVYLGLLVW
                     ASISTVLILHRHKQKMEHIPRNKHSSQSSTESRVIKTILLQLSTFMFFYIISCLFQLF
                     LSFFHNPSWLLINTSIVISGCFPAVSPFLLMNHYSIASSHCVPCIRNWRKTV"
ORIGIN      
        1 atgccattaa tgcctcatgt tcccctcctt gatccttagg ttcagacatc aggaaatgat
       61 gagatgacag ccaggaatat ggctctaggt ataatcttct tatcacagac tgcatttgga
      121 cttctgagta attcttctgt cttcttcaat ttcttagtga tttacttctc aaggtacaag
      181 ctgaactcca cagactggat tttgaattat atagttgtag ccaacttctt aactctgctg
      241 tgtaaaggag tgccacagac aatggcagct tttgggctta aagattttct aagtgatttt
      301 gggtgcaatc tcctctttta ctttcataaa atgggcagga gtacatgtat ttgcagcagc
      361 agtttgctga gtgtcttcca agccaacacc atcagcaaca ggaacttcag gtgggaagag
      421 tttaaaacca aatcatccaa ggtcagtggc ttctttcttt gtctttgctg cattctgaac
      481 atcctcatga atacttataa tctcttttac atgagtggaa aattgtgcta cagaaatgtg
      541 acaattctac aagactttgg cttctgcact gcttgtcttg acaaaactgg acaaatcttg
      601 tatactgtat tccttcctct ccctgatgct gtgtatctgg gactcttggt ctgggccagc
      661 atatctactg ttctcatctt gcacaggcac aagcagaaaa tggagcacat tcccagaaac
      721 aaacattctt cacaatcatc cactgagtcc agggttataa aaaccatcct tcttcaattg
      781 agtacattta tgttctttta tataatttcc tgcctctttc aactatttct gtctttcttt
      841 cataatccca gctggttact cataaacaca tccatagtca tctctgggtg tttcccagct
      901 gtaagtccct ttctgctcat gaaccactac tccatagcat ctagccactg tgttccttgt
      961 atacggaatt ggaggaaaac agtttaa
//
