LOCUS       XM_039097001             909 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus vomeronasal 1 receptor 2 (Vom1r2),
            mRNA.
ACCESSION   XM_039097001
VERSION     XM_039097001.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086019) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..909
                     /gene="Vom1r2"
                     /note="vomeronasal 1 receptor 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:494253"
                     /db_xref="RGD:1359101"
     CDS             1..909
                     /gene="Vom1r2"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 4"
                     /protein_id="XP_038952929.1"
                     /db_xref="GeneID:494253"
                     /db_xref="RGD:1359101"
                     /translation="MYLKDLIIGIVFLLQSTIGILGNFSLLSCNLINYYIEHKMKTSN
                     LILSHLFTANILILVSSGLLHTEQTFVIKVFINDFVCKFLLYIQRLGRNVSISTTCFL
                     SVFQAITISPRNSFWMNLKAKAPHHIGLFTSLCWILYMVLNMIFPVYMYNKENRKNLT
                     HKNYLKYCSTVVHDDFVDRLYTTIIVLPEILFSFIIIWSSSSMVIILYMHKQSVQHIH
                     STSVCSRTSPESRATQRILTLMSTFISFYALSSILQGCIALVYNPGWWLINITAVISM
                     CFPTFGPFVMNHDSIKLSYARNSQRT"
ORIGIN      
        1 atgtacctca aggatttgat aataggaata gtgttcttac ttcagagtac aattgggatt
       61 ctgggaaatt tctctcttct ttcctgcaac ctgatcaatt actatattga acataaaatg
      121 aagacttcaa atttgattct ttcacatcta tttacagcca acattttgat ccttgtgtct
      181 tcaggactgc tacatacaga acaaactttt gtgataaaag tatttatcaa tgattttgtc
      241 tgcaaattcc ttttgtatat tcaaaggctg ggcagaaacg tgtccattag taccacctgc
      301 tttttgagtg tcttccaggc aatcaccatc agtcctagga actctttttg gatgaacctt
      361 aaagccaaag ctccacatca tattggtctc ttcacttctc tttgctggat tctctacatg
      421 gtattaaata tgatttttcc tgtgtatatg tataacaaag agaacagaaa gaatctgaca
      481 cataaaaatt acttgaaata ttgttccact gtagttcatg atgactttgt agaccgatta
      541 tatactacaa ttattgttct tcctgaaatt ttgttttctt tcattatcat ctggtcgagc
      601 agctccatgg ttatcattct ctatatgcac aagcaaagtg ttcaacatat ccatagcacc
      661 tctgtttgct ccagaacatc tcctgaatcc agagctaccc agaggatact gacccttatg
      721 tccacattta taagttttta tgccctctct tcaatcttac aaggctgcat tgctcttgta
      781 tataatcctg gttggtggct gataaacatc acagcagtca tttcaatgtg ttttcctact
      841 tttggacctt ttgtgatgaa tcatgactca attaagcttt cctatgctag aaattctcaa
      901 cgtacatag
//
