LOCUS       NM_001167548             951 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 1 receptor 13 (Vom1r13), mRNA.
ACCESSION   NM_001167548
VERSION     NM_001167548.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 951)
  AUTHORS   Young,J.M., Massa,H.F., Hsu,L. and Trask,B.J.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
COMMENT     PROVISIONAL REFSEQ: This record is based on preliminary annotation
            provided by NCBI staff in collaboration with Janet Young. The
            reference sequence was derived from JAXUCZ010000001.1.
            
            Sequence Note: A set of diverse V1R queries was aligned via BLAST
            to the RGSCv3.4 assembly to find candidate V1R-containing genomic
            regions. Open reading frames (ORFs) for V1R genes and pseudogenes
            were then identified.
            
            ##RefSeq-Attributes-START##
            non-AUG initiation codon :: PMID: 19952141
            RefSeq Select criteria   :: based on single protein-coding
                                        transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-951               JAXUCZ010000001.1  68937347-68938297
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..951
                     /gene="Vom1r13"
                     /note="vomeronasal 1 receptor 13"
                     /db_xref="GeneID:100312667"
                     /db_xref="RGD:2316473"
     CDS             1..951
                     /gene="Vom1r13"
                     /note="non-AUG (CUG) translation initiation codon;
                     vomeronasal 1 receptor Vom1r13"
                     /codon_start=1
                     /product="vomeronasal 1 receptor 13"
                     /protein_id="NP_001161020.1"
                     /db_xref="GeneID:100312667"
                     /db_xref="RGD:2316473"
                     /translation="MRNVWQHILKSVFLSNTMDARNLGVGITFLLQSVVGLLGNISLI
                     FYYLIIYYKKHKIKPMDLILMHLIIVNILIILSKGLATTMATFGLKLFFNDWSYQFFM
                     YVLRVFRSMSIVTICLLSVFQAITIMPRNSCLKNLRVKTTMDISFCISLCWVLYIIIN
                     VIFPLYMSITLSRKNITKDTNFKLYTIVGYDKITGSLYTTFFVFPEILFSGLITWSSS
                     SMIVLLYRHKRRVQYLQSTHASHSSSPESRATQNILVLVSIFLAFYTISAISHAYSAL
                     FHSSDGWLMIFSNILTLCLPTSSLFVLMSHSSSLSKLCFL"
     exon            1..951
                     /gene="Vom1r13"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgagaaatg tttggcagca tattttgaag tcagtttttc tcagtaacac tatggatgcc
       61 aggaatttgg gagtaggaat aacatttctg ttacagagtg tagttggact tctaggaaac
      121 atctctctca ttttctacta cttgattatt tactataaga aacacaaaat aaagcccatg
      181 gatttgattc tcatgcacct gataatagtt aacatcttga tcattctctc taaaggattg
      241 gctaccacaa tggcaacttt tggcttgaaa cttttcttta atgattggag ctatcaattt
      301 tttatgtatg tcctaagagt tttcaggagc atgtccattg tcaccatctg cctcttaagt
      361 gtcttccagg ctatcaccat catgccaaga aactcctgtt tgaaaaatct tagagtcaag
      421 actacaatgg acattagttt ctgcatttct ctctgctggg tcttgtacat cattataaat
      481 gttattttcc ctttgtacat gtccataaca ttaagtagga aaaatataac aaaggataca
      541 aatttcaagc tctatactat tgtaggatat gacaaaatca caggttcatt atatacaaca
      601 ttctttgtgt ttcctgaaat tctgttttct ggtcttatca cttggtccag tagctcaatg
      661 attgtccttc tgtacaggca caaacgacga gttcaatacc tccaaagtac tcatgcttcc
      721 catagcagct cccctgaatc cagagccact cagaacattc tggtactagt ttccatcttt
      781 cttgcttttt atacaatctc tgccatctca catgcttaca gtgctctttt tcacagttca
      841 gatgggtggc tgatgatttt ctcaaacatt ttaactttgt gtcttcccac ttcaagcctt
      901 tttgtactta tgagtcactc atcctctctg tccaaactct gctttctcta g
//
