LOCUS       NM_001166761             966 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 1 receptor 104 (Vom1r104), mRNA.
ACCESSION   NM_001166761 XM_001076115
VERSION     NM_001166761.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 966)
  AUTHORS   Young,J.M., Massa,H.F., Hsu,L. and Trask,B.J.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
COMMENT     PROVISIONAL REFSEQ: This record is based on preliminary annotation
            provided by NCBI staff in collaboration with Janet Young. The
            reference sequence was derived from JAXUCZ010000004.1.
            
            On Feb 3, 2010 this sequence version replaced XM_001076115.1.
            
            Sequence Note: A set of diverse V1R queries was aligned via BLAST
            to the RGSCv3.4 assembly to find candidate V1R-containing genomic
            regions. Open reading frames (ORFs) for V1R genes and pseudogenes
            were then identified.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-966               JAXUCZ010000004.1  124326103-124327068
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q34"
     gene            1..966
                     /gene="Vom1r104"
                     /gene_synonym="V1ra1"
                     /note="vomeronasal 1 receptor 104"
                     /db_xref="GeneID:685945"
                     /db_xref="RGD:1587829"
     CDS             1..966
                     /gene="Vom1r104"
                     /gene_synonym="V1ra1"
                     /note="vomernasal 1 receptor Vom1r104; vomeronasal 1
                     receptor, A1"
                     /codon_start=1
                     /product="vomeronasal 1 receptor 104"
                     /protein_id="NP_001160233.1"
                     /db_xref="GeneID:685945"
                     /db_xref="RGD:1587829"
                     /translation="MSEFLFFSLQPLFSYMMNKNIRLHTNSNIRNTFFSEIGIGISGN
                     SLLLLFHIIKFIHGQRSRLTDLPIGLLLMLLMVAFIATDIFISQREWDDIICKFLVYL
                     YRIFRGLSLCTTCMLSVLQAIILSPRSSCLAKFKHKSPYYVSCAMLFLSALYMIISSH
                     LLVSIIATPNLTTNELMHVTQSCSILPVSYLMQSMFSILVAIRDIFLISLMVFSTWYM
                     VALLCRHRKQTQHLQGTSLSPKGSPEQRATRSILMLMSFFVLMSIFDSIVSCSRTMFL
                     NDPTSYNIQIFVMHIYATVSPFVFMSIEKHIVNFFRSMCVRVMNV"
     exon            1..966
                     /gene="Vom1r104"
                     /gene_synonym="V1ra1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgagtgagt ttctgttctt ttctcttcag ccactgttct catatatgat gaataagaat
       61 atcagactcc acactaattc taacataaga aatacctttt tctctgaaat tggcattggt
      121 atctcaggca acagcctcct acttctcttc cacatcatca agttcattca tgggcagaga
      181 tccagactca ctgacctacc cattggactc ctactgatgc tactgatggt ggcattcata
      241 gccacagaca tttttatttc tcagagggaa tgggatgaca tcatatgtaa attccttgtc
      301 tacctgtaca gaatttttag aggtctctcc ctttgtacca cctgcatgct gagtgtcctg
      361 caggccatca ttctcagtcc cagaagctcc tgtttagcaa agtttaagca taagtcaccc
      421 tattatgtct cctgtgccat gcttttcctg agtgccctct acatgatcat tagcagtcac
      481 ctcttagtat ccatcattgc caccccaaat ttgaccacaa atgaacttat gcatgtcact
      541 cagtcctgct ctattctacc cgtgagttac ctcatgcaaa gcatgttttc tatacttgtg
      601 gccatcagag atatatttct tattagtctc atggtcttct cgacttggta catggtggct
      661 ctcttgtgta ggcacaggaa acagacacag catcttcagg gtaccagcct ttccccaaaa
      721 ggatccccag agcaaagggc cacccgttct atcctgatgc tcatgagctt ctttgtcctg
      781 atgtccatct tcgacagcat tgtctcctgc tcaagaacta tgttcctgaa tgatccaaca
      841 tcttacaata ttcaaatatt tgtgatgcac atctatgcca cagtcagccc ttttgtgttt
      901 atgagcattg aaaaacatat agttaacttt tttaggtcaa tgtgtgtgag ggtgatgaat
      961 gtttga
//
