LOCUS       NM_173296               1300 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus vomeronasal 1 receptor 100 (Vom1r100), mRNA.
ACCESSION   NM_173296
VERSION     NM_173296.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1300)
  AUTHORS   Young,J.M., Massa,H.F., Hsu,L. and Trask,B.J.
  TITLE     Extreme variability among mammalian V1R gene families
  JOURNAL   Genome Res 20 (1), 10-18 (2010)
   PUBMED   19952141
REFERENCE   2  (bases 1 to 1300)
  AUTHORS   Dulac,C. and Axel,R.
  TITLE     A novel family of genes encoding putative pheromone receptors in
            mammals
  JOURNAL   Cell 83 (2), 195-206 (1995)
   PUBMED   7585937
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Nov 27, 2020 this sequence version replaced NM_173296.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: U36895.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-79                JAXUCZ010000004.1  124025375-124025453
            80-164              JAXUCZ010000004.1  124026687-124026771
            165-1300            JAXUCZ010000004.1  124027585-124028720
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q34"
     gene            1..1300
                     /gene="Vom1r100"
                     /gene_synonym="V1ra12; Vn3; Vnr3"
                     /note="vomeronasal 1 receptor 100"
                     /db_xref="GeneID:297439"
                     /db_xref="RGD:1549727"
     exon            1..79
                     /gene="Vom1r100"
                     /gene_synonym="V1ra12; Vn3; Vnr3"
                     /inference="alignment:Splign:2.1.0"
     exon            80..164
                     /gene="Vom1r100"
                     /gene_synonym="V1ra12; Vn3; Vnr3"
                     /inference="alignment:Splign:2.1.0"
     exon            165..1300
                     /gene="Vom1r100"
                     /gene_synonym="V1ra12; Vn3; Vnr3"
                     /inference="alignment:Splign:2.1.0"
     CDS             180..1115
                     /gene="Vom1r100"
                     /gene_synonym="V1ra12; Vn3; Vnr3"
                     /note="vomeronasal type-1 receptor A12; vomeronasal
                     receptor 3; putative pheromone receptor VN3; vomeronasal
                     V1r-type receptor V1ra12; vomernasal 1 receptor Vom1r100;
                     vomeronasal 1 receptor, A12"
                     /codon_start=1
                     /product="vomeronasal type-1 receptor 100"
                     /protein_id="NP_775418.2"
                     /db_xref="GeneID:297439"
                     /db_xref="RGD:1549727"
                     /translation="MMNKNSRVHTDSNIRNTFFTEIGIGILANSFLLLFHIFKFIRGQ
                     RSRLTDLPIGLLSLIHLLMLLMGAFIAIDIFISWRGWDDIICKFLVYLYRSFRGLSLC
                     TTCMLSVLQAITLSPRSSCLAKFKHKSPHHVSCAIISLSILYMFISSHLLVSINATPN
                     LTTNNFMQVTQSCYIIPLSYLMQSMFSTLLAIRDISLISLMVLSTCYMVVLLCRHRNQ
                     IQHLQGTNLSPKASPEQRATQTILMLMTFFVLMSIFDSIVSCSRTMYLNDPTSYYIQI
                     FVVYIYATVSPFVFMSTEKHIVNFLKSMCVRVKNV"
ORIGIN      
        1 caggagcccg tgattaaggg actttgaact tttcaaggga tttggagttt tatgaagaat
       61 ttgaagattt acagagttta caggaatgga gctgaccagt cactatgaca tgccttatat
      121 ctccaagagc ataaatataa ggcatggcat gagaggacca gcagccactg ttctcatata
      181 tgatgaataa gaacagcaga gtccacactg attctaacat aaggaatacc tttttcactg
      241 aaattggcat tggaatctta gccaacagtt tcctacttct cttccacatc ttcaagttta
      301 ttcgtggaca gaggtccaga ctcactgacc tgcccattgg tctcttgtcc ctaatccacc
      361 tactgatgct actgatgggg gcattcatag ccatagacat ttttatttct tggaggggat
      421 gggatgacat catatgtaaa ttccttgtct acttgtacag aagttttaga ggtctctctc
      481 tttgtaccac ctgcatgttg agtgtcctgc aggccatcac cctcagcccc agaagctcct
      541 gtttagcaaa gttcaaacat aagtctcccc atcacgtctc ctgtgccatt atttcgctga
      601 gcatcctcta catgttcatt agcagtcacc tcttagtatc catcaatgcc acccccaatt
      661 tgaccacgaa caactttatg caagttactc agtcctgcta cattataccc ttgagttacc
      721 tcatgcaaag catgttttct acacttctgg ccatcagaga tatctctctt attagtctca
      781 tggtcctctc gacttgttac atggtggttc tcttgtgtag gcacaggaat cagatccagc
      841 atcttcaagg gaccaacctt tccccaaaag catctccaga acaaagggcc acacagacca
      901 tcctgatgct catgaccttc tttgtcctaa tgtccatttt cgacagcatt gtctcctgtt
      961 caagaactat gtatctgaat gatccaacat cttactatat tcaaatattt gtagtgtaca
     1021 tctatgccac agtcagccct tttgtgttta tgagcactga aaaacatata gttaactttt
     1081 tgaagtccat gtgtgtgagg gtgaagaatg tttgaatatt cattaatgga caagatcctt
     1141 taagaggagc caatgtagtc atcagaactg tcagtcatgg tgtgctgtct atgtgctttg
     1201 gtatatgtga atcatgaagt tgtttttctg ttaaaatgat ttactttaac caactcatga
     1261 ttgtaaacat gtaacagaag attaaacaat atccccttcg
//
