LOCUS       NM_001001720            2115 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus vimentin-type intermediate filament associated
            coiled-coil protein (Vmac), transcript variant 1, mRNA.
ACCESSION   NM_001001720 XM_343666
VERSION     NM_001001720.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Yamamoto,Y., Irie,K., Kurihara,H., Sakai,T. and Takai,Y.
  TITLE     Vmac: a novel protein associated with vimentin-type intermediate
            filament in podocytes of rat kidney
  JOURNAL   Biochem Biophys Res Commun 315 (4), 1120-1125 (2004)
   PUBMED   14985129
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On Oct 19, 2022 this sequence version replaced NM_001001720.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.32899.1,
                                           SRR26643299.38125.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840109, SAMN12840124
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-216               JAXUCZ010000009.1  1636512-1636727     c
            217-2115            JAXUCZ010000009.1  1633874-1635772     c
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q11"
     gene            1..2115
                     /gene="Vmac"
                     /note="vimentin-type intermediate filament associated
                     coiled-coil protein"
                     /db_xref="GeneID:363327"
                     /db_xref="RGD:1303340"
     exon            1..216
                     /gene="Vmac"
                     /inference="alignment:Splign:2.1.0"
     CDS             26..541
                     /gene="Vmac"
                     /codon_start=1
                     /product="vimentin-type intermediate filament-associated
                     coiled-coil protein"
                     /protein_id="NP_001001720.1"
                     /db_xref="GeneID:363327"
                     /db_xref="RGD:1303340"
                     /translation="MSAPPPLQIREANAHLAAVHRRAAELERRLLAAERTMRAQAERL
                     ACQDQQLRAALDELGRAKDREIFTLQEQLLSSEATVRSLQAAVEQRDQMIQELQPRAD
                     LLQDITRQRPPLAALLATLEEAEELGPLPSSHSHGAQLLPDGPGPPLGNSMREEEGQD
                     DQQPAVFGTTV"
     exon            217..2115
                     /gene="Vmac"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggagcctgca tggcggcccg gggccatgtc tgcgccgcca cctctgcaga tccgggaggc
       61 gaacgcgcac ctagcggccg tgcaccggcg agcggcggag ctggagaggc ggctgctggc
      121 ggcggagcgc acgatgcgtg cgcaggccga gcgtctggcc tgccaggacc agcagctgcg
      181 cgcggccctg gacgagctgg gtcgcgccaa ggaccgggag attttcaccc tccaagagca
      241 gctgctgagc tctgaggcca ccgttcgcag cctgcaggct gcagtggagc agagggacca
      301 gatgatccag gagctacagc ctcgggctga cctgctgcag gacatcactc gacaacggcc
      361 acccctggct gcactgctgg ccaccctgga ggaggcagag gaactgggcc ccttgccttc
      421 cagccacagc catggggccc agctacttcc tgatgggcct ggcccacccc tgggcaacag
      481 catgagggag gaggagggcc aggatgacca gcagcctgct gtgtttggaa ccacagtgtg
      541 agctgccctg acacatctca ggtcaaggcc ctctgggaat ttcactccta gagtcctgaa
      601 catcaccagt gtcctagagg ggtcttaatt catctaaaca tcaaaacagg tttaaagcca
      661 agatctcatt taaaacaatt tttccccagt gctggaatat ctgctacatt ccactgattt
      721 taaataattt tagaaacaaa ggcaagggca gtaactcaga gggtggaacg ttctcctagc
      781 atgcacacac aaagtccaaa gccaagcatc ccaacatgag tgggatggtg gggactgacc
      841 ctcatctcca gatctgactc tgaagcgtag tgtttcctgt ttgggacagg gatccaggta
      901 gccaggccag cctcagactt gctgggtcag gagtatagca tggatctctg ctaggttgac
      961 gggcgcccac ccacctgtgg ggattttgtt tgtatttttg tttgagatgg ggtctctata
     1021 gcctaggctt cccaagtact tttgaatata gatgtgaacc ctatgccctg ctgatgggag
     1081 tccaccctcc ccttcttact cttgtgcctc ctgaaccatt cttcatacca agcggaatcc
     1141 cctctcatgt ttcgttgctt ctgagtaaga agacagttag ccttggatct ctttcccata
     1201 actctaccct tccttctagg aagagcaggt gggttgagac accacaacca agagtgcctc
     1261 aggctttgca ctgtctgttc cctctgcctc aatgtctttc cctggttcca cacttggttc
     1321 cttgacactc aggtcactct caaatgcccc tttctggagg ggccttccca ccagcatctc
     1381 taaagtaatt cgggccagct ggtcactgcc ctgtactgtg attgattggt ttggtgtttt
     1441 gaagcttagt cttgtgtagc ccaggctggc ctctaaactt ttaatatagc ttaggttggc
     1501 tttgaactcc tgatcctctt gcttcagcat ctctagtact agtatgacag gcttgtgcaa
     1561 ccacgcacag ccccatcctg ggaccacctt tccaggggga aagcagtgac taggaagcag
     1621 gaaattctgt cttctgtttc catcagtgcc tagcacagcc ctggaggccc tgccttagcc
     1681 agaaacctcc tggatagctg atgagccctt tcctagtttc cagggacaac agtgtttttg
     1741 tagatagtct cctttgcacc ccaagagaat ctattttttt aaatcctggt atctatgctg
     1801 tctaggctta agatggtaag gtacattgcc cttgtcaaga gcagtgagag ggtcccccac
     1861 aaacccttac atccagaggt ggtctccgtt gagtttcatg gaccctgtgc tcagggtcgt
     1921 tgagcagcca ccaaggtgga agatgggctg ttccaaacag aagatcttcc agccatccag
     1981 tgtgcccaga gtctgacaga ccctcagcta tgggagacag aggcccattt tatcttgggg
     2041 atggaggaga gagggagcta tttgtatagg ggaaggcagg cctgtctgca ccagaataaa
     2101 ttggttattt ctcaa
//
