LOCUS       XM_008773668             690 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus vestigial-like family member 1
            (Vgll1), mRNA.
ACCESSION   XM_008773668
VERSION     XM_008773668.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008773668.3.
            
            On Jan 21, 2021 this sequence version replaced XM_008773668.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..690
                     /gene="Vgll1"
                     /note="vestigial-like family member 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:363508"
                     /db_xref="RGD:1564038"
     CDS             1..690
                     /gene="Vgll1"
                     /codon_start=1
                     /product="transcription cofactor vestigial-like protein 1"
                     /protein_id="XP_008771890.1"
                     /db_xref="GeneID:363508"
                     /db_xref="RGD:1564038"
                     /translation="MEEVKKTGVQMPKSRQKPIKTEWSAQCVLFTYFQGDISSVVDEH
                     FSRALSNLKRPQELSSSSHSENVILKNDSSMPPNQWCLSSWKKPQPETSPANGASSSS
                     LDEYGPKAMNWHPLSLPKTPYAHPQELWQFPSSARPEFLEPAYFRVFPDRHLAPQVYP
                     DGRHGSLQHLVQEVRHQNHRLEPAAKASCSHVKTAGSTASLLNLPPSSGHCKEILTDT
                     CKVTVLDSDLA"
ORIGIN      
        1 atggaagaag tgaagaagac tggtgtccag atgcctaaaa gcaggcaaaa accgataaag
       61 acggagtgga gtgcccagtg tgtccttttc acctactttc aaggggacat cagtagcgtg
      121 gtggacgagc acttctccag agctctgagt aacctcaaga ggccccagga actgagttcc
      181 tcaagccaca gtgaaaatgt gatcctcaag aatgatagca gcatgccccc gaatcaatgg
      241 tgtctctctt cttggaaaaa gccacagcca gaaacatctc ctgcaaatgg cgccagtagc
      301 agcagcttgg atgaatatgg tcctaaggcc atgaattggc acccactgtc cttgcctaag
      361 accccctatg cacatcctca ggagctgtgg caattcccct cctcagcgag gccagaattc
      421 ctagagcctg cctactttcg agtctttcct gacaggcatc tggctccaca agtctatcct
      481 gatgggagac atgggtccct tcaacattta gtccaggagg ttagacacca aaaccatcgt
      541 ctggaacctg ctgccaaggc gagctgcagc catgtgaaga cagccggaag cacagcatca
      601 ctcttgaacc tgcctcccag ctcaggccac tgtaaggaga tacttacaga cacttgcaag
      661 gttactgtgc ttgacagtga cttggcatga
//
