LOCUS       XM_039083020            2155 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus UDP-glucuronate decarboxylase 1
            (Uxs1), transcript variant X5, mRNA.
ACCESSION   XM_039083020
VERSION     XM_039083020.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2155
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2155
                     /gene="Uxs1"
                     /gene_synonym="UGD"
                     /note="UDP-glucuronate decarboxylase 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 ESTs, 8 long SRA reads, 8 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 35 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:246232"
                     /db_xref="RGD:628680"
     CDS             150..1457
                     /gene="Uxs1"
                     /gene_synonym="UGD"
                     /codon_start=1
                     /product="UDP-glucuronic acid decarboxylase 1 isoform X5"
                     /protein_id="XP_038938948.1"
                     /db_xref="GeneID:246232"
                     /db_xref="RGD:628680"
                     /translation="MMECQVPQRNRPPEEQCILSTRAAFSIWILELKTDSDSVVSAVW
                     GNFVNMSFLLNRSIQENGELKIESKIEEIIEPLREKIRDLEKSFTQKYPPVKFLSEKD
                     RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV
                     VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTS
                     EVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNT
                     FGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSS
                     PVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPV
                     VPLEEGLNKAIHYFRKELEYQANNQYIPKPKPARVKKGRTRHS"
ORIGIN      
        1 gcggctggcc ggcggggcag gccccggacc cgtgcggttc ctgggcatgg tgagcaaggg
       61 gctgctgcgc cttgtctctt cagtcaaccg caggaagatg aagcttctgc tgggcatcgc
      121 gctgttcgcc tacgccgcct aacttgctca tgatggagtg ccaagtgcct cagagaaaca
      181 ggccaccaga agaacagtgc attctcagta caagggcagc gttcagcatt tggatattgg
      241 agttgaagac tgacagtgac tctgttgtat cagctgtttg gggcaacttt gttaacatga
      301 gctttctgct caacaggtct atccaggaaa atggtgaact aaagattgaa agcaagattg
      361 aagagattat tgaaccatta agagagaaaa tcagagattt ggaaaaaagt ttcacccaga
      421 aatacccacc agtaaagttt ttgtcagaaa aggaccggaa gaggattttg atcactggag
      481 gtgcgggctt tgtgggctcc catctaactg acaaactcat gatggatggc catgaggtga
      541 ccgtggtgga caacttcttc acaggcagga agagaaatgt ggaacactgg attggccatg
      601 agaacttcga gctgattaac catgatgtgg tagagccact ctacatcgaa gttgaccaga
      661 tctaccatct ggcttctcca gcctcccctc caaactacat gtacaacccc atcaagaccc
      721 tgaagacaaa tacaattgga acactaaaca tgttgggact ggcaaagcgt gtgggtgccc
      781 gtctgctcct agcctccaca tctgaggtat atggagatcc tgaggtccac cctcaaagtg
      841 aggactactg gggccacgtg aatcccatag gaccccgagc ctgctatgac gagggcaaac
      901 gtgttgcgga aaccatgtgc tatgcctaca tgaagcagga aggtgtggag gtgcgggtgg
      961 ccaggatctt caacaccttt gggccacgaa tgcacatgaa tgatgggagg gtggtcagca
     1021 acttcatctt acaagcgcta caaggggagc cgctcacagt atatggatct gggtctcaga
     1081 cacgggcatt ccagtatgtt agcgatctag tgaatggcct ggtagcactg atgaacagca
     1141 atgtcagcag ccctgtcaac ctgggaaatc cagaagaaca cacaatcctg gaatttgctc
     1201 agttaattaa aaaccttgtt ggtagtggaa gtgaaattca gtttctctct gaagctcagg
     1261 atgatccaca gaaaagaaaa ccagacatca aaaaagcaaa actgatgctg gggtgggagc
     1321 ctgtggttcc attggaggaa ggattgaaca aagccatcca ctatttccgg aaggaactag
     1381 agtaccaggc taataaccag tacatcccta aacccaagcc tgccagagtg aagaagggcc
     1441 ggacgcgcca cagctgagtt agccttggga tgcgagactc tattttactt tataaggtgg
     1501 acttttgtgg gatttttttt ttttttttaa gacttaaaca ggtgtcatga agaacaaact
     1561 ggaattttat tctgaagctt gctttaaaga cactgatgtg cctaaaagct cccttgaact
     1621 ctgcagactt tgccttgcac tttttaactc tgtctttttt atgcacaaca gcctagatgc
     1681 attctctgct attttcaggt ttttttatct tgctgttaga gtgtatgctg taactgtcac
     1741 tgacagtttt atttactggt ttctttgtga agctgaaaag aaacattaaa tggggtggaa
     1801 aatgccaatt ttatttataa aagtgagtac tttataaatg agatgttaca ctatgcataa
     1861 agaatacaaa cctagaggta tggccagctg ggcagtgcac cagtgtttat ttggggacag
     1921 atgaaagaac tccattggaa agctttgcat ttctttttta attctgaatt ttctgaaggt
     1981 ctagttttca gttacagact tgactttgaa acatccctgt tggttcttga tcaaagatat
     2041 ttgaaatcac tactgtgttg tgctgcatat tggggtgggg gtggggacaa tgttaacata
     2101 ttcttggtta accatggtta aatatgctat tttaataaaa tattgaaact cgtca
//
