LOCUS       XM_017596274            1770 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus UDP-glucuronate decarboxylase 1
            (Uxs1), transcript variant X9, mRNA.
ACCESSION   XM_017596274
VERSION     XM_017596274.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017596274.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017596274.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1770
                     /gene="Uxs1"
                     /gene_synonym="UGD"
                     /note="UDP-glucuronate decarboxylase 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 ESTs, 5 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 101 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:246232"
                     /db_xref="RGD:628680"
     CDS             130..1068
                     /gene="Uxs1"
                     /gene_synonym="UGD"
                     /codon_start=1
                     /product="UDP-glucuronic acid decarboxylase 1 isoform X9"
                     /protein_id="XP_017451763.1"
                     /db_xref="GeneID:246232"
                     /db_xref="RGD:628680"
                     /translation="MMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIE
                     VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPE
                     VHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM
                     NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNP
                     EEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGL
                     NKAIHYFRKELEYQANNQYIPKPKPARVKKGRTRHS"
ORIGIN      
        1 gctgttcgcc tacgccgcct tttcacccag aaatacccac cagtaaagtt tttgtcagaa
       61 aaggaccgga agaggatttt gatcactgga ggtgcgggct ttgtgggctc ccatctaact
      121 gacaaactca tgatggatgg ccatgaggtg accgtggtgg acaacttctt cacaggcagg
      181 aagagaaatg tggaacactg gattggccat gagaacttcg agctgattaa ccatgatgtg
      241 gtagagccac tctacatcga agttgaccag atctaccatc tggcttctcc agcctcccct
      301 ccaaactaca tgtacaaccc catcaagacc ctgaagacaa atacaattgg aacactaaac
      361 atgttgggac tggcaaagcg tgtgggtgcc cgtctgctcc tagcctccac atctgaggta
      421 tatggagatc ctgaggtcca ccctcaaagt gaggactact ggggccacgt gaatcccata
      481 ggaccccgag cctgctatga cgagggcaaa cgtgttgcgg aaaccatgtg ctatgcctac
      541 atgaagcagg aaggtgtgga ggtgcgggtg gccaggatct tcaacacctt tgggccacga
      601 atgcacatga atgatgggag ggtggtcagc aacttcatct tacaagcgct acaaggggag
      661 ccgctcacag tatatggatc tgggtctcag acacgggcat tccagtatgt tagcgatcta
      721 gtgaatggcc tggtagcact gatgaacagc aatgtcagca gccctgtcaa cctgggaaat
      781 ccagaagaac acacaatcct ggaatttgct cagttaatta aaaaccttgt tggtagtgga
      841 agtgaaattc agtttctctc tgaagctcag gatgatccac agaaaagaaa accagacatc
      901 aaaaaagcaa aactgatgct ggggtgggag cctgtggttc cattggagga aggattgaac
      961 aaagccatcc actatttccg gaaggaacta gagtaccagg ctaataacca gtacatccct
     1021 aaacccaagc ctgccagagt gaagaagggc cggacgcgcc acagctgagt tagccttggg
     1081 atgcgagact ctattttact ttataaggtg gacttttgtg ggattttttt ttttttttta
     1141 agacttaaac aggtgtcatg aagaacaaac tggaatttta ttctgaagct tgctttaaag
     1201 acactgatgt gcctaaaagc tcccttgaac tctgcagact ttgccttgca ctttttaact
     1261 ctgtcttttt tatgcacaac agcctagatg cattctctgc tattttcagg tttttttatc
     1321 ttgctgttag agtgtatgct gtaactgtca ctgacagttt tatttactgg tttctttgtg
     1381 aagctgaaaa gaaacattaa atggggtgga aaatgccaat tttatttata aaagtgagta
     1441 ctttataaat gagatgttac actatgcata aagaatacaa acctagaggt atggccagct
     1501 gggcagtgca ccagtgttta tttggggaca gatgaaagaa ctccattgga aagctttgca
     1561 tttctttttt aattctgaat tttctgaagg tctagttttc agttacagac ttgactttga
     1621 aacatccctg ttggttcttg atcaaagata tttgaaatca ctactgtgtt gtgctgcata
     1681 ttggggtggg ggtggggaca atgttaacat attcttggtt aaccatggtt aaatatgcta
     1741 ttttaataaa atattgaaac tcgtcagtca
//
