LOCUS       NM_001014113            2488 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus UTP14A small subunit processome component
            (Utp14a), mRNA.
ACCESSION   NM_001014113 XM_229110
VERSION     NM_001014113.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2488)
  AUTHORS   Baltz AG, Munschauer M, Schwanhausser B, Vasile A, Murakawa Y,
            Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E,
            Bonneau R, Selbach M, Dieterich C and Landthaler M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 2488)
  AUTHORS   Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein
            C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J and
            Hentze MW.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC099799.1.
            
            On Aug 7, 2005 this sequence version replaced NM_001014113.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC099799.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132270, SAMD00132272
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq36"
     gene            1..2488
                     /gene="Utp14a"
                     /note="UTP14A small subunit processome component"
                     /db_xref="GeneID:317579"
                     /db_xref="RGD:1359313"
     exon            1..61
                     /gene="Utp14a"
                     /inference="alignment:Splign:2.1.0"
     CDS             36..2333
                     /gene="Utp14a"
                     /note="UTP14, U3 small nucleolar ribonucleoprotein,
                     homolog A; UTP14A small subunit (SSU) processome
                     component"
                     /codon_start=1
                     /product="U3 small nucleolar RNA-associated protein 14
                     homolog A"
                     /protein_id="NP_001014135.2"
                     /db_xref="GeneID:317579"
                     /db_xref="RGD:1359313"
                     /translation="MSAIKATKGLLALSQQDDLMDLPTNYPLSDSEDEAGSDGERKHQ
                     KLLEAIGSLSGKNRWKLPERSEAGLKVSEFNVSSEGSGEKLALSDLLEPLKSSSSLAA
                     VKKQLNRVKSKKTLELPLHKGEVERVHREVAFSNTSQALSKWDSVVQKNRAAEQLVFP
                     LEKEPTFVPMEHVFCEWKARSPLEQEIFNLLHKNKQPVTDPLLTPVEKASLKAMSLEE
                     AKIRRAELQRARALQSYYEARARRMKKIKSKKYHKIVKKGKAQKALKDFEQLRKVDPD
                     AALEELEKMEKARMLERMSLKHQNSGKWAKSKAIMAKYDLEARQAMQEQLAKNKELTQ
                     KLQVVSESEEERDAEEEEALVPDIVNEVQKAAHGPNPWMLRSCNHDAKENEIQADPEQ
                     LPEPAAPEFSKNEGDEKPVAEEGKLLEELEKRRSLRKRSELNHDAEPARDQKPKDSTN
                     QEVLSELRALSKKLSKENHPFEKQKESPAKTVGLVQEEEPGPEEDEPLLLQRPERVRT
                     LEELEELGKEYSLPNKELSRPSVEGEQMRTNPQNQTKGKNKKEQMISLQNLLTTRTPS
                     VTSLALPTTVEELDDEVKRNQKQMIKEAFAGDDVIKEFLKEKREAVQANKPKDVDLTL
                     PGWGEWGGMDLKPSAKKRRRFLIKAPEGPPRKDKNLPNVIINEKRNIHIAAHQVRVLP
                     YPFTHHQQFERTIQNPIGSTWITQRAFQKLTAPKVVTKPGHIIKPITADDVGRQSSPR
                     SDLSVMQTNPKRHCKHQKQLKKKAL"
     exon            62..137
                     /gene="Utp14a"
                     /inference="alignment:Splign:2.1.0"
     exon            138..208
                     /gene="Utp14a"
                     /inference="alignment:Splign:2.1.0"
     exon            209..273
                     /gene="Utp14a"
                     /inference="alignment:Splign:2.1.0"
     exon            274..416
                     /gene="Utp14a"
                     /inference="alignment:Splign:2.1.0"
     exon            417..569
                     /gene="Utp14a"
                     /inference="alignment:Splign:2.1.0"
     exon            570..689
                     /gene="Utp14a"
                     /inference="alignment:Splign:2.1.0"
     exon            690..784
                     /gene="Utp14a"
                     /inference="alignment:Splign:2.1.0"
     exon            785..908
                     /gene="Utp14a"
                     /inference="alignment:Splign:2.1.0"
     exon            909..986
                     /gene="Utp14a"
                     /inference="alignment:Splign:2.1.0"
     exon            987..1374
                     /gene="Utp14a"
                     /inference="alignment:Splign:2.1.0"
     exon            1375..1772
                     /gene="Utp14a"
                     /inference="alignment:Splign:2.1.0"
     exon            1773..1966
                     /gene="Utp14a"
                     /inference="alignment:Splign:2.1.0"
     exon            1967..2066
                     /gene="Utp14a"
                     /inference="alignment:Splign:2.1.0"
     exon            2067..2469
                     /gene="Utp14a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccgttcttga cccatgtgag ttaccggcta ctaagatgag cgcgatcaaa gctacgaagg
       61 gccttctggc tttgagccag caggacgatc taatggattt gccaaccaac taccctttga
      121 gtgacagtga agatgaggcg ggcagtgatg gagaaagaaa gcatcaaaaa cttctggaag
      181 caattggttc ccttagtgga aaaaataggt ggaaattgcc tgagagatct gaagctggtc
      241 tgaaagtgtc tgagtttaat gttagttctg aaggatctgg agaaaaattg gccctttcag
      301 atttgcttga acctcttaaa tcttcatcct cattggctgc tgttaaaaag caactgaata
      361 gagtcaaatc aaagaagact ttggaattac ctcttcacaa aggagaggtt gaacgggtcc
      421 acagagaagt ggccttcagt aacacttcac aagccctctc caaatgggat tctgttgttc
      481 agaagaaccg ggcagcagag cagctggtct ttcctctgga gaaggagccg acttttgttc
      541 ccatggaaca cgtgttttgt gagtggaagg caagaagtcc actggaacag gaaatcttta
      601 acctcctcca taagaacaaa cagccagtga cagacccttt actgacccct gtggaaaaag
      661 cctccctcaa agccatgagc ctggaagagg ctaagattcg cagagcagag cttcagaggg
      721 cccgagctct gcagtcctac tatgaagcca gggctcgaag aatgaagaaa atcaaaagta
      781 aaaaatatca caaaattgtg aagaagggaa aggcccagaa ggccctcaaa gactttgagc
      841 agctaaggaa ggttgatcct gatgctgcat tggaagaact ggaaaaaatg gaaaaagcca
      901 gaatgctgga acgaatgagc cttaagcatc aaaacagtgg gaaatgggcc aagtcaaagg
      961 ccattatggc aaaatatgac ctggaggccc gccaagctat gcaagaacag ttggctaaga
     1021 acaaggaact gacacaaaag ctgcaagttg tttcagagag tgaggaagag agagatgctg
     1081 aagaggaaga agccctagtc cctgatatag tgaacgaagt gcagaaggct gcccatggac
     1141 ccaatccgtg gatgctccgg agttgcaatc atgatgcaaa agaaaatgag atccaggccg
     1201 atcctgaaca actacctgag cctgcggccc ccgagttctc taaaaatgag ggagatgaaa
     1261 aaccagtggc agaggaaggc aaattgttgg aggagttgga gaaaaggaga tcccttcgga
     1321 aaagatcaga gctcaaccat gatgctgagc cagcgcgtga ccaaaagcca aaagattcta
     1381 ccaaccagga ggtgttatct gaattgaggg cattgtctaa gaaactcagt aaggaaaacc
     1441 atccattcga gaagcaaaag gagagtccag caaagactgt tggcctggtc caggaagagg
     1501 aacctggccc agaggaagat gagcctctat tgctgcagag gccagagaga gtacgaactc
     1561 tggaggaact agaagagcta ggtaaagagt acagtcttcc aaataaggag ctctctagac
     1621 cttcagtaga aggggagcag atgaggacga acccacaaaa tcagaccaag gggaaaaaca
     1681 agaaggagca gatgattagt ctacagaacc tcctgactac aagaactcct tctgtgacat
     1741 cactggcact tccgacaaca gtggaggagt tggatgatga agtgaagaga aaccaaaagc
     1801 aaatgataaa ggaagctttt gctggggatg atgtcatcaa agagttccta aaagagaaga
     1861 gagaagctgt ccaggccaat aagccaaagg acgtggatct gaccttgcct ggctggggag
     1921 agtggggcgg gatggacctg aagcccagtg ctaagaaaag acgccggttt ctcattaaag
     1981 cccctgaagg tcctccaaga aaagataaga atttgcccaa cgtgattatt aatgagaagc
     2041 gtaatatcca cattgcagct caccaggtgc gggtgcttcc gtatccattc acccaccatc
     2101 agcaatttga aaggaccatc cagaatccca tagggtccac atggatcacc cagcgagcat
     2161 tccaaaagct gactgctccc aaggttgtga ccaagccagg ccatattatc aagcccataa
     2221 cagcagacga tgtgggtcgc caatcttccc caaggtctga cctgtctgtc atgcagacca
     2281 atccaaaacg acactgcaaa catcaaaagc aactgaagaa aaaagctcta taggttgaaa
     2341 tatctgagga gtgccctgac tattcttttg ctttgtctgt gctgcaaatt ttttaattcc
     2401 aaaactggct taataaacac tgtacttcag ccatatctta gaaataaatg ccttttttgt
     2461 ttacctttaa aaaaaaaaaa aaaaaaaa
//
