LOCUS       XM_228538               6860 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uracil phosphoribosyltransferase
            homolog (Uprt), mRNA.
ACCESSION   XM_228538
VERSION     XM_228538.10
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_228538.11.
            
            On Jan 21, 2021 this sequence version replaced XM_228538.9.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6860
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6860
                     /gene="Uprt"
                     /note="uracil phosphoribosyltransferase homolog; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 19 ESTs, 2 long SRA reads, 5 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 139 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:317237"
                     /db_xref="RGD:1564806"
     CDS             182..1111
                     /gene="Uprt"
                     /codon_start=1
                     /product="uracil phosphoribosyltransferase homolog"
                     /protein_id="XP_228538.3"
                     /db_xref="GeneID:317237"
                     /db_xref="RGD:1564806"
                     /translation="MATELQRPDSMPCHNRQVNSTSSPSPERLLAEDPVLDHAEENNA
                     AMAKLTLLPGHAHSSVLSERDSPACCSTNLHCENHSDSSDSGNYEAPVGDSLLGDCEL
                     YPQIGAQLKLLPMNDQIRELQTIIRDKTASRGDFMFSADRLIRLVVEEGLNQLPYKEC
                     MVTTPTGHKYEGVKFEKGNCGVSIMRSGEAMEQGLRDCCRSIRIGKILIQSDEETQRA
                     KVYYAKFPPDIHRRKVLLMYPILSTGNTVIEAVKVLIEHGVQPSVIILLSLFSTPHGA
                     KSIIQEFPEITILTTEVHPVAPTHFGQKYFGTD"
ORIGIN      
        1 aatcagcgaa gaatcaaaag agttaacaaa ccagcatgcc gtagactggc agagagatag
       61 gccaataagg tgtctaagcc ggcagtgcgt ctggtgtggg cgggtatggg acaaagcgtg
      121 cgaaaggacc gcggaggcct agggggcttg atagcagcgg ggatagcccg gggccccgtg
      181 tatggccacg gagttacagc gtccggactc catgccctgt cacaaccggc aagtaaactc
      241 tacttctagc ccaagtcccg agcgcctgtt agccgaggac ccggtcctgg atcatgcaga
      301 agaaaataac gctgctatgg ctaagctgac tctcctccct gggcacgccc attctagcgt
      361 gctttcagag cgggactctc cggcctgctg cagcactaat cttcactgtg agaaccacag
      421 tgacagtagt gacagtggca actacgaagc acctgtcggc gactccctgc taggggactg
      481 tgaactctac ccacagattg gggctcagct taagttgctg cctatgaatg atcagatccg
      541 ggagctgcag actatcatcc gggacaagac agccagtaga ggggacttca tgttttctgc
      601 ggatcgtttg atcagacttg ttgtagaaga gggattgaat cagctgccgt ataaagaatg
      661 catggtgacc actccgacag ggcacaagta tgaaggagtg aaatttgaga aaggaaattg
      721 tggggtcagc ataatgagaa gcggtgaggc aatggaacaa ggtttgcgag attgctgtcg
      781 atccatacgg attgggaaga tcctgattca gagcgatgag gagacacaaa gggccaaagt
      841 atattatgcc aagttccccc cggacattca tcgcagaaaa gtccttctga tgtatccaat
      901 tctcagtact ggaaatacag taatcgaagc tgtaaaggtt ctcatagaac atggagttca
      961 acccagtgtt attatcctac tcagtctgtt ctccaccccg catggtgcca aatcaatcat
     1021 tcaagaattt ccagagatca caattttaac tactgaagtt catcctgtcg cacctacaca
     1081 ttttggacag aaatactttg gaacagacta agttattcaa cgaaaatgaa ataccttgca
     1141 taataatatg gttgtaaatg gatttcatat ctgtttatac tgatttgttt gaggaataat
     1201 ggaggaaata tgttaggaat gcctttttaa cattggaagt aggtgtagca acaagaaata
     1261 ttggaagttt atttatttga tttggttatt tctttacatg tggtaccaaa ttcagtagtg
     1321 aagcacaacc atagtgctta gaaaagatgg aaacgttaat tgtatgttca tagaagtcac
     1381 tgaatcctta gtacatggaa actgtagaac ttgtgaaaca ccccctcccc ctttcttggt
     1441 ttggaagttg ttgcagctgc aaagaaaacc caaatgagag ttagttctgt gacacactgc
     1501 agtttacatt ttccttactg tgctttagct ctagactgtt ttcctgtatg tgggtcttgt
     1561 caccctccgg actctatata ctttatatat gcaggtaccc tggagaggag agaacgagaa
     1621 tatatcctgg aattttatgt tgccatttat gtcctcgctt aatttgaagg ctcaggatgt
     1681 ctcttaactt gtcaactaag ccgttgtgtt cctcatggct catttcccca agtggggatt
     1741 gagggaaggt gtttgccaag ctggaacaca gggaaaaaga cgaagggcct ttttagtaac
     1801 tgaatctgta acaggagtct acagagacta aaccgcggat gcctgatatt gacccaagag
     1861 ggctcaatca gccctctaca aagaagttag tggatggaga tctttctaag gtgtgaggga
     1921 agtggaggct ttgcatttca tggccaataa gtaaatcagc acggttctcg gctgttgttt
     1981 ttcaagacag ggtttctctg tgttcctctg gctgttctgg aactcactct gtagaccagg
     2041 ctggcctcta actcatggcg atccagctgc ctctgcttcc caggtactag gattaaaggc
     2101 aggcagcacc acccaatatg caatacggtt cttttaattt agttgtttct actagttgcc
     2161 tttgatttgg aacttagtta ttttgcatgt tttatgacta taactgtatt aaagtagaga
     2221 atacgtatgt tcttttaaaa tatatgattt gtatctgttc atatttaagc ttctgaaagg
     2281 gagacgaaac aaactttgaa tcagactttg cacttttgaa atgaacttat aaaacccaga
     2341 ttccgatttt acactgatac tgtggtggct gggtgattac ttgattagtt tacatggctc
     2401 atggcccaat agacagctgt tgtgagacta tgttcgaaag tataagaaaa agtacaaggg
     2461 agtctcttag actgaagctg aagaggaagg aaagcaacct ggggtacatg gaatggattt
     2521 taccttatgg ttttagcctg ctaagctcca ctgtactttt acttttgttg ttgttcttgt
     2581 ttctttgaga cagagcttct ctgtgtagcc ctggctatcc tggaacatgc tctgaagacc
     2641 aggctagctt ccaactcaga gatccaccag tctctgcttc ccaagtactg ggattaaaag
     2701 tgtatgctac catgcccacc tactttcttt ttgaagacta ttatgtacga aaagtaacat
     2761 ccatctaaca gttcttccag agcagaatgc tgcctttcaa gttcttcctg aactctcccc
     2821 caccccctct tttttgagat agggtcttat tgtgtatctc tggctagcct ggaacacaca
     2881 cagacattct cttgcctctt gagtcctggg attaaaagtg tgctaaaagt tacatttata
     2941 tttgttatta ggtgttatgt gagtacaaat tcagatagac cagatctgtt gatgttgtta
     3001 ctgcactgaa tcagttggaa agacaatgct cactaacctg ggtgtgctag gaggatttca
     3061 actttgagac ctgcataagt aactgagtca gatcttgtct caaaaaattc ttgttttgcc
     3121 cattaaccta agaattgctg cgactcaatt gaattggtgc ttttcttggt tgcagtattt
     3181 tctttgaata tgagataatt tcaaactact ctgtagggat aaaaccatat tttaagcaaa
     3241 ttcttttttt ttttattttg aatcatgtct tttgtacata ggccagcttt gaacttgctg
     3301 tgtagtcagt tctgactttg aactcctgtt ctcactgcct ccactgactt ctgggatgaa
     3361 aggcttacca cttgaatgcc atttaaaaca aattcttttt ctacgattaa ccatttagat
     3421 tcaaatgtct gttgcttttc agcaagaaac atgattaaaa gttaactaca tttgagtccc
     3481 acgaggaagc gtagtataaa cagtaggaat aattcaataa ggtcatattc tcctctgatg
     3541 tttgtgccct acactcctgc agatataact ctgatctctg aattttggaa tgttttagca
     3601 aacaaattcg tacttgcagg gctaatcact tgcaggactc tattttctaa agtcaacaga
     3661 agattaacag actactaaaa gtaagattga ctttagtggc gtgaacttca gagcagtata
     3721 aattgtgcaa gttctttatt gaaaaataca agctcgagtt aaatgatctg caaatagcac
     3781 aaagctgtta ttctcaaagt acagcgcgca tcataattat ttagagggct acagattgct
     3841 ggagcccacc tctacagttt ctgagtcaat gccttgattt tcaacattgc ttctttttat
     3901 aacataggca tttaatgata taaagcttcc ggtaaagatt aagctgattt ttgatatgtt
     3961 ttcattttaa ttcaggtaaa aatattttct tttttatttc ttcaacccag ggtcatttag
     4021 aagcatcaac cagttgcaaa tatattcgta ccattttcca tatttctctt cgatattgct
     4081 tccaagttta attccatggt ggtcagagaa tataattgtt agcatttgaa ttctttcaat
     4141 ttgggagatt gtttagacat aggatcttgt ccataaacta ttgttagttg gtaagtctac
     4201 ttcctaccaa catgattact tggaatgtat gcatattctg tgttgtttgc tatgaatttc
     4261 aggttaagtt ggttgataaa gctgttcaaa tattccactt ccctcattct ttctacctgt
     4321 tctattgatt attaggagaa ggatgttgaa agctcagact agaagtgttg tatttctttc
     4381 ttctttgaat tctatgaagg tttcgctttg tgtattttga agtgctcttg ttcgctgtgt
     4441 agactcttag gatggttgta gtctcttgat gctgtgaccc tttaaccacc ctgaaatgtt
     4501 ccattttcta tctgttaata ctctgtgctg caattgcaga tttcctttga ctagatttac
     4561 tttaacacgc ttcagttttc atgtgaattt atgatagatc tgtttagaga tgcatcttgc
     4621 tttgtaaaaa tccattttga cagtgtctgc cgtttgttgc agtgtttaga tagttttcgt
     4681 gtcgtgtaat tattgacatg attactttta gatctaccat ctggctattt ccttctaacc
     4741 ttactttttc ttcatttcta cctttttgat tattatatat aattctattt tatgtcttca
     4801 tgacgtttgt gtaagcttct ccactaagtc caccctccag gaccttggcc caaacccatc
     4861 ccctttctct attatgtagc tctagctgtc ctgaaactta ctgtgtggac taggctgtcc
     4921 ttgaactcat agtgtccgga ctaaaggcat gtaccaccac acttggccag cgtagtctcc
     4981 cttaaaggaa gactgctgta tttttctgaa gatttacatt taatatagca gttgtagagc
     5041 aaacaattta taaaaataat agcatgagta tatccaacat ttggaggatt ctatgcaaaa
     5101 tatagacttg aagcagttat tccatttata aagccattat atacatctca atatttttat
     5161 attaatctga ttattttccc tttgtctacc attatttgaa cattgtggta agcttatatg
     5221 aaactgctta tcatattaat ttgtaaatgt cacttagctt ctcatattag tcattttcca
     5281 ttgatatcac atcttgaaga tgcttaaatt aagttgttca gcacacataa ttatcagtgc
     5341 attctgtgag ctgtttaata tacttgaact tcaccagcat tgttcacctc ccaccatagc
     5401 acacagagat agcatagtta ctttattcta cagtcactca gataaccatt atacattatg
     5461 ctttctccca aataattggc tcttgaccaa gtgccagata ttgttaggga aaggtgatgt
     5521 cattgttgag caagatttgt ttatgttccc aatcaatatt ttagtttatt tgagctgctg
     5581 taaaaaaata ccagacttgg tgggtttttt gtttttttca tgacagagtt tctctgtgta
     5641 accatcctgg ctgtccaaga actggttttg tagaccaggc tgccctcgaa ctcagagaga
     5701 tctgcccgcc tctacctcct gggtgctgga ttaaaggtat ggaccaccac tcctggcagg
     5761 gctggcttct tatggcaaat ctaagggtgt agtttagaat tatttctact tctgctgtaa
     5821 aatcaagtac aacttcctat gtgctgttct tgtggtgagg gcaggcagtg catattaatg
     5881 taagttggtt ttgccttcag agaacttgga agtttatagg aattctgcaa gtgttgctgt
     5941 gccattgtct atcatgaagg gctgttgatt catatctggg tcaggctcca agtgttttaa
     6001 actgatctaa agaccctatt cgttcatgcc tttgcccaac tgtgagtact aacactgtcc
     6061 agctttagtc aaggaatctg cctgtcccag gttgctaaag cctttctagg ctgcttcctg
     6121 tcttctggaa gagtgatcct tctactgatc caatctactt accatttttt tctgaatgcc
     6181 attcattaaa cgcaaattcc ttttgctcta gcagtcacac tactgagtat gtaagcagag
     6241 agaatgaaat caccaggctg aggagacatc tgcactcatg cgttcattga agcagtattc
     6301 tcaataatta aaaactagaa acagccaaag tgtacatcac atgataaatg tataaagagt
     6361 atggtgcatt tatatgatag attactattc agccatacaa aggaatgaaa tcctgtcatc
     6421 tgtgacacag tcagatggaa caaaagattt gttaagcgag tgaaacaagc cagtcacaca
     6481 ttaacactgc atgatttctg ttcgtgtgga atccagtgaa aaatgatctc atacaagttg
     6541 ttatcaaaat cttgggagag atactcgaat ggggaaaggt caaacaaggg tcactaagtt
     6601 gtagttactt agaagaaagt tctgttgtac tattacatag ttacgtgtct gtagatcatc
     6661 attaatgtac gatacatgaa aattagaaga aaatatttga cgtttttatt atgaagaagt
     6721 gatgaggaaa gaaatgcaca tgatttaaat attatacagt gtatacatgt actgaaatat
     6781 atctaattaa tatgtacaaa ttttcttttt atggatcact taaaataaat ttaaataaat
     6841 gaaaaataat agttgagttt
//
