LOCUS       XM_003750953            3823 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus unk zinc finger (Unk), transcript
            variant X2, mRNA.
ACCESSION   XM_003750953
VERSION     XM_003750953.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_003750953.5.
            
            On Jan 21, 2021 this sequence version replaced XM_003750953.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3823
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3823
                     /gene="Unk"
                     /note="unk zinc finger; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 26 ESTs, 1 long SRA read,
                     9 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 221 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:360663"
                     /db_xref="RGD:1309224"
     CDS             125..2557
                     /gene="Unk"
                     /codon_start=1
                     /product="RING finger protein unkempt homolog isoform X2"
                     /protein_id="XP_003751001.1"
                     /db_xref="GeneID:360663"
                     /db_xref="RGD:1309224"
                     /translation="MSKGPGPGGSAASSAPPAATAQVLQAQPEKPQHYTYLKEFRTEQ
                     CPLFVQHKCTQHRPYTCFHWHFVNQRRRRSIRRRDGTFNYSPDVYCTKYDEATGLCPE
                     GDECPFLHRTTGDTERRYHLRYYKTGICIHETDSKGNCTKNGLHCAFAHGPHDLRSPV
                     YDIRELQAMEALQNGQTTVEGSIEGQSAGAASHAMIEKILSEEPRWQETAYVLGNYKT
                     EPCKKPPRLCRQGYACPYYHNSKDRRRSPRKHKYRSSPCPNVKHGDEWGDPGKCENGD
                     TCQYCHTRTEQQFHPEIYKSTKCNDMQQSGSCPRGPFCAFAHIEPPPLSDDVPPSSAV
                     SSPTQPGPVLYMPSAAGDSVPVSPSSPHAPDLSALLCRSSGLASPPHLCSSPPGPSRK
                     ISNLEGLVFPGEASLAPGSYKKAPGCEREDQVGAEYLKNFKCQAKLKPHSLEPRSQEQ
                     PLLQPKQDVLGILPVGSPLTSSISSSITSSLAATPPSPAGTSSAPGMNANALPFYPTS
                     DTVESVIESALDDLDLNEFGVAALEKTFDNSTVPHPSNITIGGSLLQSSAPVNIPGSL
                     GSSASFHSASPSPPVSLSSHFLQQPQGHLSQSENTFLGTSASHGSLGLNGMNSSIWEH
                     FASGSFSPGTSPAFLSGPGAAELARLRQELDEANGTIKQWEESWKQAKQACDAWKKEA
                     EEAGERASAAGAECELAREQRDALELRVKKLQEELERLHTVPEAQTLPAAPDLEALSL
                     STLYSIQKQLRVHLEQVDKAVFHMQSVKCLKCQEQTRTVLPCQHAVLCELCAEGSECP
                     VCQPGRAHALQS"
ORIGIN      
        1 ctttgctgcc gtgcgggggg tcttcacgtt ctcgtggcgc ggcgcaggcg ctgtgggtct
       61 tcggcgcgga ccgcgcagac tgaataataa aaggggagcg gcgaagaggc aggaagacag
      121 gaccatgtcg aagggccccg ggcccggcgg ctcggcagct tcctcggcgc ccccggccgc
      181 taccgctcag gtgctgcagg cacagcccga gaaaccgcag cactacacgt acctgaagga
      241 gttccgcaca gagcagtgcc cactcttcgt gcagcacaaa tgcacacagc atcggcccta
      301 tacctgcttc cactggcact ttgtgaacca gcgtcgtcgc cgttccatcc gccggcggga
      361 tggcactttc aactacagtc cagatgtcta ctgcaccaag tacgacgagg ctacaggcct
      421 ctgcccagag ggcgacgagt gcccattcct gcacaggacc acaggggaca ctgaacgcag
      481 gtatcacctc cgttactata aaactggaat ctgcatccat gagacagact caaaaggcaa
      541 ctgcaccaaa aatggcctgc actgcgcttt tgcccatggc ccgcatgacc tccgctcccc
      601 tgtttacgac atcagggagc tccaggccat ggaggccttg cagaatggcc agactacagt
      661 agagggcagc atagagggcc agtcagctgg ggcagcaagc catgccatga tagaaaaaat
      721 cctcagtgag gagccccggt ggcaagagac tgcttatgtg ctggggaact acaagacaga
      781 gccgtgcaag aaaccccctc ggctgtgccg ccagggctat gcctgtccct actaccacaa
      841 cagcaaggac cggcgccgga gtcctcggaa gcacaaatac aggtcatctc catgtccaaa
      901 cgtcaagcat ggggacgagt ggggagaccc tggcaagtgt gaaaatggag acacctgtca
      961 gtattgtcac actcgcacag agcagcagtt ccaccccgag atctacaagt ccaccaagtg
     1021 caacgacatg cagcagtccg gcagctgtcc ccgaggacct ttctgcgcct ttgcccacat
     1081 agaaccgcca cccttaagtg atgatgtgcc gccttcctca gccgtatcca gccctaccca
     1141 gccgggtcca gttttgtaca tgccatctgc tgccggagac tcggtccctg tgagcccctc
     1201 cagcccgcat gcccctgacc tcagcgccct cctctgtagg agcagtggcc tggccagtcc
     1261 acctcacctc tgcagctccc cgcctggccc cagccgcaag atctcaaacc tggagggcct
     1321 ggtcttccct ggggaggcca gcctcgcccc tggcagctat aagaaagctc ctggctgcga
     1381 gagggaagac caggtcgggg cggagtacct gaagaatttc aagtgccagg ctaaattaaa
     1441 accccattcg ctagagccca ggagccaaga gcagcctctg cttcaaccca aacaggacgt
     1501 gctgggcatc ctccctgtgg gcagccccct gacttccagc atctcttcca gtattacctc
     1561 cagcttggca gccactcccc ccagccctgc aggcaccagc agcgcccccg gcatgaatgc
     1621 aaatgctctg cccttctacc caaccagcga cacggtagag tcggtcatag agtctgcctt
     1681 ggatgacctg gacctgaatg agtttggagt agcagccctg gagaagactt ttgataacag
     1741 cacagtgccc caccccagca acatcacaat cggcggcagt ttgttgcaga gctccgcgcc
     1801 tgtgaacatc cctggctcct taggcagctc agcctccttc cactctgctt ctccatcccc
     1861 tcccgtcagc ctctcctcac atttcctgca gcaaccccag ggacacttga gtcagtcaga
     1921 aaacacattt ttggggacct cagcgtcaca tggatctttg ggtctgaacg ggatgaacag
     1981 cagcatctgg gagcattttg cctctggaag cttctcccca ggcacttccc ctgccttcct
     2041 atcagggcca ggggctgctg agctggcccg gcttcggcaa gagctagatg aagctaacgg
     2101 caccatcaag cagtgggagg agtcctggaa gcaggccaag caggcttgtg atgcctggaa
     2161 gaaggaagcc gaggaggccg gagagcgggc cagtgcagct ggagcagagt gtgagttggc
     2221 ccgggagcag cgggatgccc tggagctgcg ggtgaagaaa ctgcaggagg agttggagcg
     2281 gctgcacaca gtgccagaag cccagaccct gccagccgcc cctgacctgg aggcgctctc
     2341 cctctccacc ctgtactcca tccagaagca actgcgggtc cacctggaac aagtggacaa
     2401 ggctgtgttc cacatgcagt cagtgaaatg ccttaagtgt caggagcaga cccggacagt
     2461 gctgccgtgc caacatgctg tgctgtgtga gctctgtgct gagggcagtg agtgccctgt
     2521 ctgccagcct ggccgggccc atgccctcca gtcgtgaccc tgcagaccag gcccaggtgg
     2581 gcctagacct tttcacctag gactttttaa agtatatata tgtatgtatg tatgtatgta
     2641 cgtatgtatg tatatgtata tgattatgta catgtataca tttatgtgca ggtgtgcgtg
     2701 gtgccagcgt gtgcacagtg tctgtgtgta tatctggaca tagatataga cacacacttt
     2761 aaaacagact taccaagcac tttttaaaga agaaactatt ttgcagtcct ctcctgtccc
     2821 ttccccatcc tttctgctca aagacaacgt ccctcttttc ccactggcct tttgacagtg
     2881 aatatgtttt tgtctctttt tttaatgtag gaactaacta tttttaactt cttcctgggg
     2941 ccagagcagg gaaggatggg aagctggaag agtaggccgg ctctgttcat cctgcctttc
     3001 cgggccaggg tctgtcggcc tggactcaga ccccgacttc ctagctgtga gggcttcagg
     3061 caggtctgaa actctaaacc agactagctc ctgagtttac caaatatgta tttaactctg
     3121 gggacagcca cagagcagga ggccgaagct acaggctagc cccactccca cacctgggcc
     3181 cttgaagctc ctcaagggtc aaggtctagt tctgtccctc aggatcttga agcctgggct
     3241 tctccttgac catttccttc tggaatccct acagtagcct ctttgacccc acagtcactt
     3301 gtcaggttgg cactgccctc acctgtccct gcctccttcc ctcgggcaca cggctgtgga
     3361 gccggcaagc tccctccctc tggcagctag cagggcgatt gttgggagga gtgcagcgtg
     3421 aggaccaagg ggcacaggcc ctgcccttct tgctgggagg aggtagtatg cattccttgg
     3481 tgctctttga gtgcagctga cgtactgccg ttctgggcag acgcctgtgt gcatgtgtgt
     3541 gcgtgcctgt ctgatgtata ttgtgtttag cttcaatttt aaaaattgtt ctgtacagag
     3601 atgcagtgaa ttgggaaagc agagtgggcg gagggaggca gccctgctcc cagtactggg
     3661 tgtccagagg gctcgagagg gcttcgaaga atccgcccca gcataggccc ctcccttggg
     3721 ctcagcacga aagggctttc aatgaattaa gtgaaaactt tttctttttt tacaaaaatg
     3781 aaaaaaatca acaaacttat tgaaaataaa ctatcaactt gca
//
