LOCUS       XM_039099227            4803 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus uromodulin-like 1 (Umodl1), mRNA.
ACCESSION   XM_039099227
VERSION     XM_039099227.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039099227.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4803
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4803
                     /gene="Umodl1"
                     /note="uromodulin-like 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 2 Proteins, and 65% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:365544"
                     /db_xref="RGD:1566039"
     CDS             1..3888
                     /gene="Umodl1"
                     /codon_start=1
                     /product="uromodulin-like 1"
                     /protein_id="XP_038955155.1"
                     /db_xref="GeneID:365544"
                     /db_xref="RGD:1566039"
                     /translation="MSRALGLALLALTCTVDLGQTSGFTENGLSLLSYQLCSYPMTRS
                     VQKLQAVQTSYTAYVYCGGWIPWKKCPKTVYRTQYLEMNVPESRNVTDCCAGFEQLGL
                     YCVLSRNRSREFASRPGVCPTAEPGPFTSSCSLDTDCPGLQKCCAWPGGHRCVSPTPT
                     GTERSIVGWYNVTVLVKMGFEDLQREDPGLRNHTRLLYSLVTSALQPLNPAVHYLTST
                     GGKDTFTTVSWLLLGFPQRMTVANVSTMLDDMVNRVYEVISIQVQDVNECLHSELQAC
                     SEGKQCWNLEGSYQCVSPQQLTTLPSQHLNHTDKDCPPIRDFVALDVTSSSFHVSWSL
                     NSTQNHTFHVQVYKGREILRSTWTGDRTLAVPDLEAGVLYRVRTSYQGCRANISATLV
                     VKTDARVFQVTIRIMNRNLTEQILNCSSREFWNFSRQLFQEVENSFPQVISNMYRQGR
                     LKMQIVSLKAGSLVVTLRLTLQDPDFLVNVGTLKPMLQPLSMSTVFQVDQQGTRVQDW
                     DECAHSSEHDCHPAARCINLEGSYTCQCLTARDANPSRAGRVCEGDMVTPTGGGLSVE
                     TTKVKAAAVSMGITTFGPETLTLSPSSEHLRSTPAEGQASTLGPPSRRDGGSTARQDR
                     NSTGQDVEVPNVTQNPHTTRESQEHMTKGPPFLTARSTGYVVWHPSPTWETPLKSTRP
                     QNEDPPPSSFPGPPSTLVAVTPETPACVPGPIGKVTISNVTSTSFSLKWSADLHLSPA
                     FCLTLVSPRGPAKTMETQHNNVTLSGLELGTLYLVEIMAKVCGKEGARTQLKVRTTAH
                     KLTGKVRIPSMQYSESFRNASSREHQEFVQMFFRTVRDSLPATLRQHMDEGRIQVDII
                     NITNGSVVVEFNLLMTADLDVREVSAGFLSAFQNTSMLEVVRGKTIIQDYNECDMRED
                     DCAPGTCTNTFGSFTCSCDGERPNSQVEYSGRSCDDASSTPQDLPLRLNLTDAVRVSC
                     EIEMVVIAIQKRFLQQEAIPEASLYLGEPSCNVSRSNSTHVFLVTGWGQCGTLVQSNM
                     TTTVVKTTLRNDLSPEGVIHHLQILSPIHCAFQNDLLTSSGYTPQWGVYTVIEDLHGT
                     GNFVTEMQLFIGDSPIPQNYSVSASDEIKIEVELHRQKSNLKVVLTECWATPSSNAKD
                     PVTFGFINNSCPVPNTYTSVIQNGNSSKAQFKLRIFSFINNSIVYLHCKLRVCMENPR
                     NSCRINCNDFRLLRSSEAIHQMTWGPLHRSEGAQACTKPGLGTGYIILIAAAVLVVVA
                     GAATLLILRYQRVKQKYNLRIQSDDFSYQVFSQ"
ORIGIN      
        1 atgtcccggg ccctggggct ggccctcctg gccttgacat gcactgtgga cctgggccag
       61 accagtggtt ttacagaaaa tggcctctct ctgctgagtt accagctgtg cagctacccc
      121 atgacccgaa gtgtccagaa gctgcaggcg gtgcagacct cttacacagc ctacgtatat
      181 tgtggaggat ggatcccctg gaaaaagtgc cccaagaccg tgtaccggac ccaatacctg
      241 gagatgaacg tccctgagtc caggaatgtg accgactgct gtgcaggttt tgagcagctt
      301 ggcctctact gtgttctgtc ccggaaccgg tccagggagt ttgcatcgag acccggggtc
      361 tgcccaacag ctgagccagg gccatttaca tcttcatgca gcttggacac agactgccct
      421 ggacttcaga agtgctgcgc ctggccaggc gggcaccgct gtgtgtcccc tacacccaca
      481 ggtacagaga ggagcatagt gggctggtac aatgtcactg tgctggtgaa gatgggcttc
      541 gaggacctgc agagagagga ccctgggctc cggaaccaca cgcgcctgct ctactctttg
      601 gtcaccagtg ccttgcagcc tctgaaccca gctgtacact acctgacctc aactggtggc
      661 aaggacacat tcaccacagt gtcatggctg ctgctgggct tcccacagcg catgactgta
      721 gccaatgtct ccaccatgtt ggatgacatg gtgaatagag tctatgaggt gatcagcatc
      781 caggtgcaag acgtgaacga gtgtcttcac agtgagctcc aagcctgctc tgaaggaaaa
      841 cagtgctgga acctggaggg ctcctaccaa tgtgtgtctc cccagcagct gaccaccttg
      901 ccttcccagc atctgaacca cacagataaa gactgccctc caatccgaga cttcgtggcg
      961 cttgacgtca ccagcagcag tttccatgtg tcctggagtt tgaattccac tcagaaccac
     1021 actttccacg tacaagtgta caagggcaga gaaatactca gaagcacttg gacaggggac
     1081 cggactctgg ctgtgcctga tttggaggcc ggagtacttt acagagtgag gactagctac
     1141 caggggtgcc gggccaacat ctctgccaca ctggttgtca agacagatgc tcgggttttc
     1201 caggtcacga tacggatcat gaaccgaaac ctgacagaac agattctcaa ctgcagcagc
     1261 agggaattct ggaacttttc tcgacagctg tttcaggagg tggaaaactc cttcccccaa
     1321 gtcatttcta acatgtacag acaggggagg ctgaagatgc agatcgtgtc tctgaaggca
     1381 gggagtctgg tggtgacgct tagactcacc ctgcaagatc ctgactttct agtgaatgtt
     1441 ggcacactga aacccatgtt gcagcctctg tctatgagca ctgtgttcca ggttgaccag
     1501 caggggacac gagtgcaaga ctgggacgag tgtgcacaca gctcagaaca tgactgccac
     1561 ccagccgcac gctgcatcaa cctggagggc tcctacacat gccagtgcct cacagccagg
     1621 gacgccaacc cctccagggc tggcagggtc tgcgagggtg acatggtgac tcccacagga
     1681 ggtggactgt ctgttgaaac aacgaaggtc aaagccgcag ctgtcagtat gggaataaca
     1741 acctttggcc cagagaccct caccttgtca ccaagttccg agcatctaag gagcacccca
     1801 gcagaaggcc aagcctcgac cctagggcct ccatctagga gagatggtgg tagcacagcc
     1861 aggcaagata ggaatagcac aggacaggat gtggaggtgc ccaacgtgac ccagaacccg
     1921 cacaccacga gagagtcaca ggaacacatg accaaaggtc cacccttcct gaccgctaga
     1981 tccacgggct atgttgtgtg gcaccctagt cccacttggg agacacctct gaaatccaca
     2041 agaccgcaga acgaagaccc tccaccttcc tctttcccag gcccaccatc gaccctagtt
     2101 gctgtgactc cagagacccc tgcctgtgtt cctggaccca ttggaaaggt cacaatctct
     2161 aatgtgacca gtaccagctt ctccctcaag tggtcggcag acctccacct ctcccctgcc
     2221 ttctgcctca cattggtctc tcctcggggc cccgccaaga ctatggagac ccagcacaat
     2281 aatgtgacat tgtcagggct ggaacttgga accttgtacc tggtggagat tatggctaag
     2341 gtgtgtggga aggaaggtgc cagaacacag ctgaaagtgc ggacaacggc ccacaaactc
     2401 actggtaaag ttcggatccc aagcatgcag tattcggaat ccttccgcaa tgccagcagc
     2461 agggagcatc aagagttcgt acaaatgttc ttcaggacgg tgcgggactc tcttccagcc
     2521 acgcttcgtc agcacatgga cgagggcagg atccaagtgg acatcatcaa catcacaaat
     2581 ggcagcgtcg tggtggagtt taatttgcta atgacagcag acctggatgt cagggaggtg
     2641 tctgctggct tcctctctgc cttccagaac acatcgatgc tggaggtagt cagaggcaaa
     2701 accattatac aagattacaa tgaatgcgac atgagggagg atgactgtgc ccctgggacg
     2761 tgcacgaaca cctttgggtc ttttacgtgt agctgtgatg gggaaagacc taactcacag
     2821 gtggaatatt ctggaagatc ctgtgatgat gccagctcca caccccagga cctgcccctc
     2881 agactcaact tgacggatgc cgttcgtgtg tcctgtgaga tcgaaatggt ggtcatcgcc
     2941 atccagaagc gctttctgca gcaggaggcc atacccgagg catccctgta cctgggagag
     3001 ccgtcctgca acgtgagcag aagcaacagc acacacgtgt tcctggtgac tggctggggc
     3061 caatgcggga ccctcgtaca gagcaacatg accaccacag tggtgaagac cacgctgagg
     3121 aacgacctgt ccccagaggg cgtcatccac cacctgcaga tcctcagtcc catccactgt
     3181 gccttccaga atgaccttct gacctcctcg ggctacaccc cacagtgggg ggtctacacc
     3241 gtcatcgaag acctccatgg taccggcaat tttgtcacgg aaatgcagct gttcattggc
     3301 gattctccca taccccagaa ctatagcgtg tccgccagcg atgagatcaa gatcgaggtg
     3361 gagcttcaca ggcagaagag caatctgaag gtcgtgttga ctgagtgctg ggccaccccc
     3421 tccagcaacg ccaaggaccc cgtcaccttc ggcttcatca ataacagctg ccccgttccc
     3481 aacacctaca ccagcgtgat ccagaacggc aactccagca aggcccagtt caagctgaga
     3541 atcttctcct tcatcaacaa ctccatcgtc tacctgcact gcaagctgag agtgtgcatg
     3601 gagaacccca ggaactcctg cagaataaac tgcaatgact tccggttatt gagaagcagt
     3661 gaagccatac accagatgac ctgggggccc ctccatcggt ctgaaggtgc acaggcatgt
     3721 acaaagccag gcctggggac tggttacatc attctcatag cagcagctgt gcttgtggtg
     3781 gtggcagggg ccgcaaccct tctgatcttg cgttaccaga gggtaaagca gaaatacaat
     3841 cttcgaatcc agtctgacga cttcagctac caagtgttct ctcagtagga ggcccagccg
     3901 cctgggagat ggagcaccct gtaaataagg tccagtggct aactcatcga acattgacag
     3961 gagtccaact ctgtacggtg ttgtaccgac acttggggat gagacctttc aatgccagca
     4021 aacctctgtc tgcccccgag agcctgaaga caccaagtac cagccagcag actggtgaca
     4081 ggcctgctga atatgagggc agaacaccgg aggggccttc atcctcaaac ccagcacaaa
     4141 cacggcccca gttaccacag tcttccaagc tataacatcc aagctgctcc cgaggccctc
     4201 gttctctgac aactacctcc tcacagacca tccccagtgc ctgtgaggtt cactcacgag
     4261 cggatccacc cactaaactc cccatacact aaactcccca tacacagaca acgctaattc
     4321 tcctctcctt atccacatgc agacgaccta ggttggatac aggaagcttt ctaatgagtc
     4381 tcagtcacat gctgtgtatg taccactctt gcaggtttcc cagtgcaccc gtggccattt
     4441 tcccatttaa ttccatgaag aggaaggtgt gatttttttg tttgtttgtt tgttttgttt
     4501 ccccacttgg ggaggtgcat acccatgcta acaggtcctt gctttgttga tttgatgaga
     4561 gaccaggatt ggttacgcag tttacacctg aggccatagc gttctcccta atgagattag
     4621 gatcataatg gcattctagc ttttaattaa tacacttact tatgtcgagt gtgactgtca
     4681 cttactcaga ccatttgggg aaatgagtct ttcgactcct tgcatagtct tgggggtgag
     4741 aatgacaaca ggggggcttc gtggctagct gaccttgagc aataaatttt tcctggcact
     4801 gaa
//
