LOCUS       XM_039111494            2445 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Uromoduilin-like (Umodl), mRNA.
ACCESSION   XM_039111494
VERSION     XM_039111494.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2445
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2445
                     /gene="Umodl"
                     /note="Uromoduilin-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 63% coverage of the annotated genomic feature
                     by RNAseq alignments"
                     /db_xref="GeneID:683598"
                     /db_xref="RGD:1585597"
     CDS             136..2445
                     /gene="Umodl"
                     /codon_start=1
                     /product="mucin-2-like"
                     /protein_id="XP_038967422.1"
                     /db_xref="GeneID:683598"
                     /db_xref="RGD:1585597"
                     /translation="MISPQSGSETGPTERTASTVHTAVTTVTNGMPQLDPTVTSTAKE
                     PVGSSTTTKFTLATSAETTQPNQTPPSSTPDKDTDTNEPLPTATTATIDTSSPTMTTV
                     TIDTSSPTTTTLRTTVLSTTTSETQERDTTTVPPTPVTSPTTSKPPDTHHSTVTQTPS
                     QPLQTGSDVGVTELTTLSPPRSITTEMRSSESPNPGETDVTMTTPLLTPSATPSMASS
                     TAKHTILSSGTGTPTVPEKLTLTPPSTTPDKVIDTIKPLPVATTATIDTSLPTMTTVT
                     IDPSLPTTTTLRTIVLSTTTSETQERDTTAVPPTPVTSPTTSKPLDTHHSTVTQTPSQ
                     TVQMSSSNSLGTTQSSDHSTGIVPSSSETTKSSTLIGTGKAPPNSSPSGGSGGGPCAL
                     DEDPDSTGGCACKDSYYSHLELSREIATLRCRPQDIEVSLRSCFLKTQHWVLKQDAFE
                     KCFSSNTTEEGHRVRVFQLEKKEGTCGLHISTNSSHALHSLDVHLEQALPGSNSTAFR
                     VLHFSCAYPLAVNVSKPVSYQEVSIPSIHVPNTGETVIILNIFTDSELSAPIKNSTAA
                     VGMPLYVVLTSTNTDPDRFALVVNEIFASTNFSNTEAKATYHFVKESCPVRGRMLRDL
                     SNGVSMFVTLAFTLSRFLNSDMLYLHARVTLCDKQVGRPCQPACSGKNPLRRKSPWDA
                     RAGTQMEPSSGKWIVFGPLLISGVHRGSRLVLTLDTVSALRGKQKEAEPGGARSGACD
                     LTGVERPLDDLRSGFAARADVVAAFSIPE"
ORIGIN      
        1 gttttagtct gggcggttgc ctcgggttta cgttccacag aaggctctgt gcttgacgag
       61 aatctatcct gctcatctac gagttcagtt gtgcttcaca ggtcaaagga atccacatct
      121 aagtcccagg aacagatgat atcaccccaa agcggtagtg aaacagggcc cacggagcgg
      181 acggcctcga cagtgcacac agccgtcacg acagtcacca atggtatgcc acagttagat
      241 cccacagtga cctctacagc aaaggagcca gtagggtcat ccacaaccac aaaattcacc
      301 ttggccactt cagctgagac cacacagccg aatcaaactc caccctcatc aacaccagac
      361 aaagacactg acacaaatga acctttaccc acggcgacca cggcaactat tgacacctct
      421 tcaccaacca tgaccacggt aactatcgac acctcttcac caaccacaac cacactgagg
      481 acaactgtac ttagcacaac cacatctgag actcaggaaa gggacactac aactgtaccc
      541 ccgaccccag tgacaagccc cacaacaagt aagccacccg acacacacca tagcacagtc
      601 acacagacac cttcccagcc actacagact ggctctgatg tcggcgtgac tgaactcaca
      661 acactgtcac caccaaggtc tatcaccact gaaatgagat catcagagtc cccaaaccca
      721 ggggagacag acgtgaccat gacgacacct ttgttgacac cttcagcgac accttcaatg
      781 gcatcaagca cagcaaagca caccatcctg tcatctggaa ctgggacacc cactgtgcct
      841 gagaagttaa ctctaactcc accctcaaca acaccagaca aagtcattga cacaatcaaa
      901 cctttacccg tggcgaccac ggcaactatt gacacttctt taccaaccat gaccacggta
      961 actatcgacc cttctttacc aaccacaacc acactgagga caattgtact tagcacaacc
     1021 acatctgaga ctcaggaaag ggacactaca gctgtacccc cgaccccagt gacaagcccc
     1081 acaacgagta agccactgga cacacaccat agcacagtca cacagacacc ttcccagaca
     1141 gtgcagatga gctcaagcaa cagcctgggt acaacccaat catctgacca ttccacagga
     1201 attgttccta gctcctcaga gacaaccaaa tcctccactt tgattgggac tggaaaagca
     1261 ccccccaact ctagtccgag tggtggttca ggaggtggac cctgtgcttt ggatgaggat
     1321 ccagacagta ccggaggctg tgcgtgcaag gacagctact attcccactt ggaactatct
     1381 agagagatag cgaccctgcg ctgcaggcca caggacattg aggtgtcgct caggagctgc
     1441 ttcctgaaga ctcaacactg ggtcctgaag caagatgcct tcgagaaatg tttcagtagc
     1501 aatacgacag aagagggtca tcgggtccgg gtctttcagt tggagaagaa ggagggaact
     1561 tgtggactcc acatctctac caacagcagc catgccctgc actctttgga tgtgcacctt
     1621 gaacaggctc tccctggctc caacagcact gcctttagag tgcttcactt cagctgtgcc
     1681 tatccactgg ccgtgaacgt cagcaaacct gtatcctacc aggaggtctc catcccctcc
     1741 atccatgttc caaataccgg ggagactgtc atcatcctga acatcttcac ggactctgaa
     1801 ctctccgctc cgatcaagaa cagtacagct gctgtcggca tgcctctcta cgtggttctc
     1861 acgtccacca acactgaccc tgaccggttt gccctggtag ttaacgagat ctttgcaagt
     1921 accaacttct ccaacacaga ggctaaggcc acctatcact ttgtgaagga gagctgccca
     1981 gtccggggcc ggatgctccg ggatttgagc aatggggtct ccatgtttgt gacactggcc
     2041 ttcactctct cacgattctt gaatagtgac atgctttacc tacacgcccg agtgaccctc
     2101 tgtgacaagc aagtgggacg accatgccaa ccggcttgta gtggaaagaa tcctctgagg
     2161 agaaagtcac cctgggatgc tcgagctggg acccagatgg agcctagcag tggcaagtgg
     2221 atcgtgtttg gacctcttct aataagcgga gtacacaggg ggtctaggct ggtgctgacc
     2281 ttggatactg tttctgctct gaggggcaag cagaaagagg cggagccggg cggcgcgcgc
     2341 tccggggcgt gcgacttgac gggcgtggaa cggccgttag acgacctgag gagcggattc
     2401 gccgctcgtg cggacgtggt ggccgccttc agtatcccag agtga
//
