LOCUS       NM_001107086            2733 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus UBX domain protein 7 (Ubxn7), mRNA.
ACCESSION   NM_001107086 XM_001073045 XM_221375
VERSION     NM_001107086.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2733)
  AUTHORS   Alexandru G, Graumann J, Smith GT, Kolawa NJ, Fang R and Deshaies
            RJ.
  TITLE     UBXD7 binds multiple ubiquitin ligases and implicates p97 in
            HIF1alpha turnover
  JOURNAL   Cell 134 (5), 804-816 (2008)
   PUBMED   18775313
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473967.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_221375.4, XM_001073045.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132278,
                              SAMEA5760383 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2733
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q22"
     gene            1..2733
                     /gene="Ubxn7"
                     /gene_synonym="RGD1306346; Ubxd7"
                     /note="UBX domain protein 7"
                     /db_xref="GeneID:303878"
                     /db_xref="RGD:1306346"
     exon            1..128
                     /gene="Ubxn7"
                     /gene_synonym="RGD1306346; Ubxd7"
                     /inference="alignment:Splign:2.1.0"
     CDS             53..373
                     /gene="Ubxn7"
                     /gene_synonym="RGD1306346; Ubxd7"
                     /note="UBX domain containing 7"
                     /codon_start=1
                     /product="UBX domain-containing protein 7"
                     /protein_id="NP_001100556.1"
                     /db_xref="GeneID:303878"
                     /db_xref="RGD:1306346"
                     /translation="MAAHGGSAAASSALKGLIQQFTAITGASESVGKHMLEACNNNLE
                     MAVTMFLDGGGIAEEPSTSSASVSAVRPHTEEEVRAPIPQKQEILVEPEPLFGGEFSL
                     LTLL"
     exon            129..276
                     /gene="Ubxn7"
                     /gene_synonym="RGD1306346; Ubxd7"
                     /inference="alignment:Splign:2.1.0"
     exon            277..2733
                     /gene="Ubxn7"
                     /gene_synonym="RGD1306346; Ubxd7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccccgtgtgt gtgtctgtgt tgttgttccg cggcggcggc ggcggcggta agatggctgc
       61 ccacgggggc tccgcggcgg cgtcgtcggc gctgaagggg ttaattcagc agttcaccgc
      121 catcaccggt gcaagtgaaa gtgtaggaaa acatatgctt gaagcttgta acaacaacct
      181 ggagatggct gtcaccatgt ttttggatgg aggaggaatt gctgaggagc ccagtaccag
      241 ttcagcaagt gtctctgctg tcagaccaca cacagaagaa gaagttcgtg ctccaattcc
      301 tcaaaagcaa gaaatattgg tggagccaga gcctttgttt ggcggtgagt tctctttgct
      361 tacccttctc tgacttcttc gttatcagga ttttaataaa gttaactgga gataacaagc
      421 gcttgctcag agattgtttc tttatttata gaatcagtgt ttatcttaca tttctgtatt
      481 ccctcttggg aagctacatt ccttaatgga gaataatgtt atacattaac aattgacaat
      541 atgttgttag aaggccaaaa agtaggaaac ttaccaaaat gaattgctgt cttttttaag
      601 gatgggcgtc actgtgtagt cctagctggc ctggaactca gaggctgcct gctctacatt
      661 ctaagttcta ggattgaaga catgcactgc tgtacctaag tccccacctc cccactccct
      721 ctggaattgc tgcctcttat ggaaatcagt tctattatat taaaaagaac tgttaatttt
      781 atgttacatc ttttcctcaa tatacacttg actggtaact ctattgtttt gtatacttta
      841 tcttctcttg ttttaatttc tccaagttct gttcctattt tggacagagg ggggaaaata
      901 gttcttattg catgaaaaaa aaattagtag tcttggcata tccagagtat gctgacatat
      961 ggggcattta atcaccttca gagaacagtg atagtttaac aagtacctac ttacctatac
     1021 gaggcaaaca tttttaggta ttgttttaaa aatagaggat tgactcttac tgtagtaggg
     1081 gaaacagatg gtgaaatgta tattgtattg agaacactag gacaggaaaa tggtttgaaa
     1141 cacgaaaata agagacccat tttaagtttt atagaaaagt tagcataggg aaaaaattta
     1201 aaattttatt tatttaccta tttgagatag gatctcactg tgtgcctttg actagtctgg
     1261 agcttgatat gtagaccggg ctgctcttaa acttggagat ctgcctgcct ctgtctcctt
     1321 agttctggaa ttaaaggtgt ataccagaca agaaggggaa ataatttttt tttttttttt
     1381 tttttggttc tttttttcgg agctggggat cgagcccagg gccttgcgct tcctaggcaa
     1441 gcgctctacc actgagctaa atccccaacc ccgaaataat tcttttaaaa gacaagaaaa
     1501 ttatccatga gatgtcagta cttcctccct aagtagagca cttacctaac atgtaagaca
     1561 cgaggcttca tccctagcat tgcagaaatt ccatctgtat tgaacatata tggacatttt
     1621 tcttgtcagt attacaaaac aacagaacaa tcatttagaa agcatttaca ttgaattaga
     1681 tctttcaaat ctagagatag tgtaaaccat aaagtgcatg cccatgtgtg catgtgcatg
     1741 catgggaagg ccagggattg agctccgcct ttagttgctc ctctgcctta ctcatcgagg
     1801 cagggtctct aagtcaaaca cagaactctc tgctacagtt gctttccctg gccagcttac
     1861 tctggggaac cccctgtttt tgtagtgttg tgtgacagaa ctttctgggc atgcacaaca
     1921 tatgtctatt cacctcagat atggggccta ctacaggtac agattccatc ggagttcaac
     1981 ttgatgaact aatgggtttt actgggatta tttaaaggag cagaatatct atctcaaaga
     2041 cagctgtgtc accaaagccc atttagcacg gtgacagctc agaaagctgg gaacctggaa
     2101 cacactgcac agccttcagg cagctcagta ggttggacag cgtcctttcc acgtgcctca
     2161 gctgtttaaa cctcttccag gcagcccacc tgggttttgt ttcttccagg cagctggtct
     2221 ggtctgggag acttctttgt gggccagctt ttattgctga ctttggcagg aaagagccta
     2281 atgaatctgg tcagtctcag gaattccctg aagatgtttt gagttacctt cccgcttaag
     2341 tcttttcctg cagggtggaa tgttttaatc tctgaggaaa tttatatacc accttccaag
     2401 gctgggatta cagatgggtt gccatgccaa ctagatattt tacttggttt gaggattcag
     2461 acttaacttc tcaggtctgc atagcaaata cttttactac taagtcccat cctgccctgg
     2521 atattcacct acatgttata ggtaatgaga gacaggaagt agtagagctt cacgtcacag
     2581 ttataaggta gtcaagttag tcctcttaaa cagaggacac tattttagtt ccctcttgga
     2641 ggtcttagtg ggccctttgc tgttttgtgg taaggaagta tacatcatag ggagcaaacg
     2701 gtgtaagaag ttgcttagtt cttggcagcc aag
//
