LOCUS       NM_001107905            1494 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus UBX domain protein 2B (Ubxn2b), mRNA.
ACCESSION   NM_001107905 XM_001070358 XM_232664
VERSION     NM_001107905.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1494)
  AUTHORS   Kress,E., Schwager,F., Holtackers,R., Seiler,J., Prodon,F.,
            Zanin,E., Eiteneuer,A., Toya,M., Sugimoto,A., Meyer,H., Meraldi,P.
            and Gotta,M.
  TITLE     The UBXN-2/p37/p47 adaptors of CDC-48/p97 regulate mitosis by
            limiting the centrosomal recruitment of Aurora A
  JOURNAL   J Cell Biol 201 (4), 559-575 (2013)
   PUBMED   23649807
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473984.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001070358.1, XM_232664.3.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132279,
                              SAMD00132291 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1494
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q12"
     gene            1..1494
                     /gene="Ubxn2b"
                     /gene_synonym="RGD1308557"
                     /note="UBX domain protein 2B"
                     /db_xref="GeneID:312965"
                     /db_xref="RGD:1308557"
     exon            1..109
                     /gene="Ubxn2b"
                     /gene_synonym="RGD1308557"
                     /inference="alignment:Splign:2.1.0"
     CDS             26..1021
                     /gene="Ubxn2b"
                     /gene_synonym="RGD1308557"
                     /note="p97 cofactor p37; NSFL1 cofactor p37"
                     /codon_start=1
                     /product="UBX domain-containing protein 2B"
                     /protein_id="NP_001101375.1"
                     /db_xref="GeneID:312965"
                     /db_xref="RGD:1308557"
                     /translation="MAEGGGAEPEEQERRSSRPRPPSARDLQLALAELYEDEMKCKSS
                     KPDRSTATAFKSPRTPPLRLYSGDQEYGGLHIAQPPTGKIVNELFKEAREHGAVPLNE
                     ATRSSSDDKAKSFTGGGYRLGSSFYKRSEYIYGENQLQDVQILLRLWSNGFSLDDGEL
                     RPYSDPTNAQFLESVKRGEIPLELQRLVHGSQVSLDMEDHQDQEYIKPRLRFKAFSGE
                     GQKLGSLTPEIVSTPSSPEEEDKSILNAAVLIDDSVPTTKIQIRLADGSRLIQRFNST
                     HRILDVRDFIVQSRPEFATTDFILVTSFPSKELTDESVTLQDADILNTVILQQLK"
     exon            110..213
                     /gene="Ubxn2b"
                     /gene_synonym="RGD1308557"
                     /inference="alignment:Splign:2.1.0"
     exon            214..364
                     /gene="Ubxn2b"
                     /gene_synonym="RGD1308557"
                     /inference="alignment:Splign:2.1.0"
     exon            365..448
                     /gene="Ubxn2b"
                     /gene_synonym="RGD1308557"
                     /inference="alignment:Splign:2.1.0"
     exon            449..558
                     /gene="Ubxn2b"
                     /gene_synonym="RGD1308557"
                     /inference="alignment:Splign:2.1.0"
     exon            559..696
                     /gene="Ubxn2b"
                     /gene_synonym="RGD1308557"
                     /inference="alignment:Splign:2.1.0"
     exon            697..858
                     /gene="Ubxn2b"
                     /gene_synonym="RGD1308557"
                     /inference="alignment:Splign:2.1.0"
     exon            859..1494
                     /gene="Ubxn2b"
                     /gene_synonym="RGD1308557"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcgggcgcc gcgagcgggt gaaagatggc ggagggtggc ggcgcggagc cggaggagca
       61 ggagcggagg tcctcgaggc cgcggccccc gagtgcgcgg gacttacagt tggccttggc
      121 agaattatat gaagatgaaa tgaaatgcaa gtcttccaag cctgacagat ctacagctac
      181 agcctttaag agcccacgaa caccgcccct tcggctttat tcaggtgatc aggaatatgg
      241 tggattacat atagctcaac ctccaactgg gaaaattgtg aacgaacttt tcaaagaggc
      301 aagggaacat ggggctgtcc ctctaaatga agccacaaga tcttcaagtg atgacaaagc
      361 taagtcattt acaggtggag ggtacagact gggcagttcc ttctataaga ggtcagagta
      421 tatctatgga gaaaatcagc tgcaagatgt tcagatttta ctgaggctgt ggagcaatgg
      481 tttcagttta gatgatggag aactgaggcc ttacagcgac ccaacaaatg ctcaattttt
      541 ggagtccgtt aagagaggag agattcctct ggagcttcag cgactggtcc acggcagcca
      601 ggtgagcctg gacatggagg accatcaaga ccaagagtac ataaaaccca gattgcgctt
      661 caaggctttt agtggagaag ggcaaaaact tggaagcctt acacctgaaa tcgtcagtac
      721 tccttcctcc ccagaagaag aggataaatc aatactgaat gcagctgttc ttattgatga
      781 ttcagtgccc actacaaaaa ttcagatcag gctggcagac ggaagtcgtc tcatacagag
      841 attcaacagc acacaccgga ttctggatgt acgagacttt atagtacagt cacgtcctga
      901 atttgcaact actgacttta ttcttgtgac ttcatttcca agtaaagagc taacagatga
      961 gagcgtgact ctccaagatg cggatattct taacacagtg atactccagc aactgaagta
     1021 gtgctgctcc gacccggaac agatagtgct gtgatcatta gtaaaacact tccagcataa
     1081 aacaaccaaa tgacttctat tattcagata aattctggtt ttgctgttac tccgtttcag
     1141 tctttgtcta gataaaagga tgatttagac taagggtaga tcttgatgtt tgagttttta
     1201 gttgtagggc tgatttatat tgatagcttg taaatgttta gatcaatcaa cttattacat
     1261 gttcagtgct aatgtaataa catttttcaa atgaaacaaa aagaggccct ttttggtaaa
     1321 tgcatttgat aaaatttgca ttcaaatttc ttaatgtagc agtgtccagt agccagaacg
     1381 gatattttgt ttgtaatatg tgccatagtg tctcctctga ttttgaaatt gttcatacaa
     1441 cagttaagat tttgcatatc tttttgcata ttgtttaaac tatgttagtg ccac
//
